Geothrix oryzae: GETHOR_11920
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Entry
GETHOR_11920 CDS
T09137
Name
(GenBank) adeC/adeK/oprM family multidrug efflux complex outer membrane factor
KO
K18139
outer membrane protein, multidrug efflux system
Organism
gex
Geothrix oryzae
Pathway
gex01501
beta-Lactam resistance
gex02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GETHOR_11920
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GETHOR_11920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gex02000
]
GETHOR_11920
01504 Antimicrobial resistance genes [BR:
gex01504
]
GETHOR_11920
Transporters [BR:
gex02000
]
Other transporters
Pores ion channels [TC:
1
]
GETHOR_11920
Antimicrobial resistance genes [BR:
gex01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GETHOR_11920
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
GETHOR_11920
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
GETHOR_11920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BDU69091
LinkDB
All DBs
Position
complement(1342060..1343550)
Genome browser
AA seq
496 aa
AA seq
DB search
MRSLRTWSVLPLTFAMVGCVSMAPKYRVPEPPVPKAWPEGPSYKAPAGAPGAVGQPAADL
AWQDFFVDAQLRKVLDLALRNNRDLRIAALNTEKARAYYRIQRAELLPSINAVGAGTRQR
LPASVSGVGRSVVVEQDTVNVGISAWELDFFGRVRSLKNRALEQYLATEQARNSAQISLL
AEVANVYLALGADRESLKLAQETLANQEASYKLIHRRFEVGASSEIDAYRAQVSVETARG
DVARYTRTVALDENALRLLVGSAVPAEWLPEALGSVTALKDIAPGLPSEVLTRRPDILMA
ENQLKAANANIGAARAAFFPRISLTTNIGTMGSELSGLFKTGSDSWAFSPQIVLPIFNAG
ARWANLKAANADRDITLAQYEKAIQVAFKEVADALAQRGTLDDQLTAQETLTRALEGAHR
LASARYSAGIDGYLSVLDAQRSLYAAQQGLIALRQAKYGNLVSLYKVLGGGWNPSERPAA
PKATPTAAAAARPSAS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgctcagaacctggtccgtccttcccctcaccttcgccatggtgggctgcgtc
tccatggccccgaagtaccgggtgcctgagccgccggtgccgaaggcctggcccgaagga
ccttcctacaaggcgcctgccggtgcccctggcgccgttggccaaccggccgccgacctc
gcctggcaggatttcttcgtagacgcgcagttgcggaaggtcctggacctggccctccgc
aacaaccgggatctgcggatcgcggcgctgaacaccgagaaggcccgggcctactaccgg
atccagcgggccgagctgctgccctcgatcaacgccgtgggcgcgggaacccgccagcgg
cttcccgccagcgtctcgggagtcgggcgatcggtcgtcgtcgaacaggacacggtcaat
gtcgggatcagcgcctgggagctggatttcttcggccgcgtccggagcctgaagaaccgg
gccctggagcagtacctcgccacggagcaggcccgcaacagcgcccagatctcgctgctg
gcggaagtcgccaatgtctacctcgccctcggcgccgaccgcgaaagcctgaagctcgcc
caggaaaccctggcgaaccaagaggcttcctacaagctcatccaccgccgcttcgaagtc
ggcgcctcctccgagatcgatgcctaccgcgcccaggtcagcgtcgagacggcgcgggga
gatgtggcccggtacacccgcaccgtggccctggatgaaaacgcgctgaggctgctggtg
ggctccgccgtgcccgcggaatggcttcccgaggccctgggcagcgtcactgcgctcaag
gacatcgcccccggactgccctccgaggtgctaacccgccgacccgacatcctcatggcc
gaaaaccagctcaaggcggccaacgccaacatcggcgcggccagggcggccttcttcccc
cgcatctccctcaccacgaacatcggcaccatgggcagcgagctctccgggctcttcaag
accggctcggattcctgggccttctcgcctcagatcgtccttccgatcttcaatgccggc
gcgcgatgggcgaacctcaaggcggccaacgccgaccgggacatcaccctggcccagtac
gagaaggccatccaggtggccttcaaggaagtcgccgatgcgctggcccaacgcggcacc
cttgatgaccagctgaccgcccaggaaacgctcacacgcgccctggaaggcgcccaccgc
ctggcctcggctcgctactcggccggtatcgatgggtatttgagcgtcctggacgcccag
cgctccctctatgccgcccagcaggggctcatcgccctccgccaagccaaatacggcaac
ctcgtcagcctctacaaggttctcggcgggggctggaacccgtccgagcgccccgctgcg
cccaaggccaccccgacggctgcggcggcagccagaccctctgcctcctga
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