Gallus gallus (chicken): 418982
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Entry
418982 CDS
T01006
Symbol
MMP1
Name
(RefSeq) interstitial collagenase
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
418982 (MMP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gga01002
]
418982 (MMP1)
Enzymes [BR:
gga01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
418982 (MMP1)
Peptidases and inhibitors [BR:
gga01002
]
Metallo peptidases
Family M10
418982 (MMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Astacin
Reprolysin_5
Reprolysin_4
Peptidase_M54
DUF4953
Peptidase_M66
Reprolysin_2
Metallopep
Motif
Other DBs
NCBI-GeneID:
418982
NCBI-ProteinID:
XP_417176
CGNC:
50888
Ensembl:
ENSGALG00000019061
UniProt:
E1C9D9
LinkDB
All DBs
Position
1:183793774..183800294
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AA seq
466 aa
AA seq
DB search
MKVLSLLLLLYAAVSSAFPVAPEKEDEGKNINLVETYLQNFYNLQKDHRPHLRQGGKNHL
AEKLKEMQEFFGLQVTGKPDRDTLEMMNKPRCGVPDVEQYVFTPGNPKWKKNNLTYRIVN
YTTKMRQTDVDEAIQKALKVWSSVTPLTFQKTEDKIADIMISFAYRDHNDNSPFDGPNGL
LAHAFQPGEGLGGDVHLDEEETWTKDGRGYNLFIVVAHELGHSLGLSHSNDPGALMYPNY
AYTDPKEFLLPQDDIDGIQAIYGQSDDAVQPTGPTTPQVCDPNLTFDAITTLRGEMIFFK
GRYMLRKHPERSETELNFISLFWPNLPSGIQAAYENIERDEVLLFKEDKYWVIRGYDIVR
GYPKPIYRLGFPKTVKRVNAAYNDETTGKTYFFVADRYWRYDENKKSMDHGYPRKIIHDF
GKIGRVDAAFQKDGYVYFFHKTTQFQFDPRAKRIVSHMKSISWFNC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcctttctcttctcctgctgctgtatgctgcagtctcctctgctttccctgtg
gctcctgaaaaagaagatgaaggaaaaaatataaatcttgtggagacttatctacagaat
ttctacaatcttcaaaaagatcatcggcctcatctaaggcaggggggtaaaaatcacctt
gctgaaaagctcaaggagatgcaggaattttttggactacaagtgactgggaaacctgac
cgtgacactttggagatgatgaataaacccaggtgtggtgttcctgatgtagagcaatat
gtcttcacaccagggaatccaaaatggaagaaaaataatctgacatacaggattgtgaat
tacaccacaaagatgagacaaactgatgtagatgaagcaatccaaaaagctctgaaagtc
tggagcagtgtgacaccattgacatttcaaaagactgaggacaaaattgcagatataatg
atctcatttgcttatagagatcacaatgacaactctccttttgatggccctaatgggctg
ctggctcatgcttttcagccaggggaaggtcttggtggagatgtgcatcttgatgaggag
gaaacctggacaaaagatggaagaggctacaacttgttcattgttgttgcccatgagctt
ggccattcactgggtctgtcccattcaaatgatcctggagcactgatgtatccaaactat
gcctacacagaccccaaagaattccttcttcctcaggatgacattgatggcattcaggcc
atatatggacagtctgatgatgctgtgcagcctacagggcccacaactccacaagtttgt
gaccctaacttgacatttgatgccattaccactttgcgtggagaaatgatattctttaag
ggcagatacatgctgcgcaaacatcctgagaggtcagagacagagctcaattttatctca
ctgttttggccaaatttgccatcaggaattcaagctgcttatgagaacattgaaagggat
gaagttttactctttaaagaggataaatactgggttatcagaggatatgacattgtacgt
ggctatcccaagccaatctatcgtttgggattcccaaagactgttaaaagagttaatgca
gcttacaacgatgagaccacaggaaaaacatatttctttgtagctgacagatactggaga
tatgatgaaaacaaaaaatccatggatcatggctatcccaggaaaataatccatgacttt
ggaaaaattggcagagttgatgctgctttccagaaagatggctatgtctacttcttccac
aaaacaactcagttccagtttgatcctcgtgccaaacggattgtcagtcatatgaagagc
attagctggtttaattgttaa
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