Gavialis gangeticus (Gharial): 109303295
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Entry
109303295 CDS
T07453
Name
(RefSeq) neutrophil collagenase-like
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
109303295
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ggn01002
]
109303295
Enzymes [BR:
ggn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
109303295
Peptidases and inhibitors [BR:
ggn01002
]
Metallo peptidases
Family M10
109303295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
DUF4953
Metallopep
Peptidase_M66
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
109303295
NCBI-ProteinID:
XP_019381030
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MTIRKKSLPFLLLACVAFSSSAPVTPEDDTTKFAEDYLKKFYSLKTDAQPHFRGKNIEAV
SETLKEMQSFFGLKVTGKLNDETIEMMNKPRCGVPDMGDYVLTEGHPKWPTNNLTYRIIN
YTPDMSRADVDAAIKQAFEVWSNVSPVTFRRIEDGEADIMISFQYRAHGDNSPFDGPNGI
LAHAFQPGLRIGGDVHFDEEETWAKYNTGYSLFIVAAHELGHSLGLSHSTDPGALMYPTY
AYTDPKKFHLPQDDINGIQSIYGKSLKPVQPTGPSTPITCDPNLTFDAVATLRGEMLFFK
GRYFWRKHSQIAEIQMNFITLFWPTLPSGIQAAYENVEKDQVVVFKENKYWVLNGFDVVR
GYPKRIHQLGFPKTVKRINAAFSDKNTGKTYFFVANKYWRYDENRQSMDEGYPRNIISDF
GKIGKIDAAVQHDGYIYLFRGTKQFQFDPKTKKVVSVLRSNSWFNC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaccataagaaagaagagccttccatttttgctgctagcatgtgtggcattctcctct
agtgctcctgtgactccagaagatgacacaacaaagtttgcagaggattacctaaaaaaa
ttctatagtctgaaaacagacgcgcagcctcattttcggggaaagaacattgaggctgta
tctgaaacactcaaggaaatgcagtcattttttggactgaaagtgactgggaagttaaat
gatgagactatagagatgatgaacaagcccagatgtggtgtgcctgacatgggcgactac
gttctaacagaagggcatccaaagtggccaacaaataacttgacatacagaattataaac
tacacacctgacatgagccgagctgatgtggatgcagctatcaaacaagcatttgaagtc
tggagtaacgtgtccccagtgacattcagaaggatcgaggatggagaagcagatataatg
atctcttttcaatatagggctcatggggacaattctccctttgatggacctaatgggata
ctagctcatgcttttcagcctggcctccggattggtggagatgttcactttgatgaggag
gaaacttgggcaaaatataacacgggctatagcttgttcattgttgctgcccacgagctg
ggccattccctgggtttgtctcattctactgatcctggagctctgatgtacccaacttat
gcttacacagaccctaaaaaattccacctccctcaagatgacattaatggcattcaaagc
atctatggaaaatctctgaaacctgttcaaccaactggaccctcaactccaataacatgt
gaccctaatttgacttttgatgctgttgctactctgcgtggagaaatgctgttctttaag
ggcagatatttctggcgcaagcatagccagatagcagagattcagatgaactttatcact
ctattctggccaacactgccatctggaattcaagctgcttatgaaaacgttgaaaaagat
caagttgttgttttcaaagagaacaaatactgggttctcaatggatttgatgtagtccgt
ggttaccccaaaagaattcatcaactgggctttccaaagactgttaaaagaattaatgca
gctttcagtgataagaatacaggaaaaacatatttctttgtagccaacaagtactggaga
tatgatgaaaacaggcaatccatggatgagggttatccaagaaacataatcagtgacttt
ggaaagattggaaagattgatgcagctgtccagcatgatggctatatctatttattccgt
ggaacaaaacagttccagtttgatcctaagaccaaaaaagttgtcagtgtcctgaggagc
aacagctggtttaactgttaa
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