Globicephala melas (long-finned pilot whale): 115841564
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Entry
115841564 CDS
T11080
Symbol
MMP1
Name
(RefSeq) interstitial collagenase
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03320
PPAR signaling pathway
gmf04657
IL-17 signaling pathway
gmf04926
Relaxin signaling pathway
gmf05171
Coronavirus disease - COVID-19
gmf05200
Pathways in cancer
gmf05219
Bladder cancer
gmf05323
Rheumatoid arthritis
gmf05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
115841564 (MMP1)
09152 Endocrine system
03320 PPAR signaling pathway
115841564 (MMP1)
04926 Relaxin signaling pathway
115841564 (MMP1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
115841564 (MMP1)
09162 Cancer: specific types
05219 Bladder cancer
115841564 (MMP1)
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
115841564 (MMP1)
09163 Immune disease
05323 Rheumatoid arthritis
115841564 (MMP1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
115841564 (MMP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmf01002
]
115841564 (MMP1)
Enzymes [BR:
gmf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
115841564 (MMP1)
Peptidases and inhibitors [BR:
gmf01002
]
Metallo peptidases
Family M10
115841564 (MMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_3
Reprolysin_4
Peptidase_M66
OGG_N
DUF4953
Metallopep
Motif
Other DBs
NCBI-GeneID:
115841564
NCBI-ProteinID:
XP_030691498
LinkDB
All DBs
Position
8:complement(78245548..78252899)
Genome browser
AA seq
470 aa
AA seq
DB search
MPRLPLLLLLLLWGVGSHSFPAATSETQEQDVETVQKYLENYYNLKSDAKQVERQRNNDP
VVEKLKQMQKFFGLKVTGKPDAETLNVMKQPRCGVPDMAQFVLTQGSPRWEDTHLTYRIE
NYTPDLSRAAVDHAIEKAFQLWSSVSPLSFTKVSEGQADIMISFVRGDHRDNSPFDGPGG
NLAHAFQPGPHIGGDIHFDEDERWTNNFRDYNLYRVAAHELGHSLGLAHSTDIGALMYPN
YIFSGDVQLSQDDISGIQAIYGPSQNPTQPIGPQTPQVCDSKLTFDAITTIRGELMFFKD
RFYMRTNPFYPEAELNFISVFWPHLPNGLQAAYEVADRDEVRFFKGNKYWAVKGQDVLYG
YPKYIYRSFGFPRTVKNIDAAVSDEDTGKTYFFVANKCWRYDEYKQSMDAGYPKMIAEDF
PGIGSKVDAVFQKDGFFYFFHGTRQYKFDTKTKRILTLQKANSWFNCRKN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcccagactgcctttgctgctgctgctgcttctctggggcgtggggtctcacagcttc
ccagcagcgacttcagaaacacaagagcaagatgtggagacagtgcagaaatacctggaa
aactactacaacctgaagagtgatgcgaagcaagttgaaagacagagaaacaatgaccca
gtagttgaaaaactaaagcaaatgcaaaagttctttgggctgaaggtgacggggaaacca
gatgctgaaaccctgaatgtgatgaagcagcccagatgtggggtgcctgacatggctcag
tttgttcttactcaggggagcccgcggtgggaggacacacacctgacctacaggattgaa
aactacacaccagatctgtcaagagcagctgtggaccatgccattgagaaagcctttcaa
ctctggagcagtgtgtcacccttgagcttcaccaaggtctctgagggtcaagcagacata
atgatatcctttgtcaggggagatcatcgtgacaattctccctttgatggaccaggtgga
aacctcgctcatgcttttcaaccaggcccacatatcggaggggatatccattttgatgaa
gatgaaaggtggaccaacaatttcagagattataacttgtatcgtgtggcagctcatgaa
ttgggccattcccttggacttgctcattctactgacattggggctttgatgtaccccaac
tacatcttcagtggtgatgttcagctatctcaggatgacatcagtgggatccaggccatc
tatggaccttcccaaaatcccactcagccaattggcccgcaaaccccacaagtgtgtgat
agtaagctaacttttgatgctataactacaatccggggagaattgatgttctttaaagac
aggttctacatgcgcacaaatcccttctacccagaagctgagctcaatttcatttctgtt
ttctggccccatctgccaaatggacttcaggctgcttatgaggttgccgatagagatgaa
gttcggtttttcaaaggtaataagtactgggctgtcaaggggcaagatgtgttatacgga
taccccaagtacatctacagatcctttggtttccctaggactgtgaagaacatcgacgct
gctgtttctgatgaagatactgggaaaacgtacttctttgttgctaacaaatgctggagg
tatgatgaatataaacaatccatggatgcaggttatcccaaaatgatagcagaagatttt
cctggaattggcagcaaagttgatgctgttttccagaaagacggatttttctatttcttc
catggaacaaggcaatacaaatttgataccaaaactaagagaattttgactctccaaaaa
gctaatagctggttcaactgcagaaaaaattga
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