Geomonas paludis: M1B72_09890
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Entry
M1B72_09890 CDS
T08160
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
gpl
Geomonas paludis
Pathway
gpl01501
beta-Lactam resistance
gpl01503
Cationic antimicrobial peptide (CAMP) resistance
gpl02020
Two-component system
gpl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
M1B72_09890
09132 Signal transduction
02020 Two-component system
M1B72_09890
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M1B72_09890
01503 Cationic antimicrobial peptide (CAMP) resistance
M1B72_09890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gpl02000
]
M1B72_09890
02044 Secretion system [BR:
gpl02044
]
M1B72_09890
01504 Antimicrobial resistance genes [BR:
gpl01504
]
M1B72_09890
Transporters [BR:
gpl02000
]
Other transporters
Pores ion channels [TC:
1
]
M1B72_09890
Secretion system [BR:
gpl02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
M1B72_09890
RTX toxin transporter
M1B72_09890
Multiple protein transporter
M1B72_09890
RaxAB-RaxC type I secretion system protein
M1B72_09890
Antimicrobial resistance genes [BR:
gpl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
M1B72_09890
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
M1B72_09890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HEAT_IPO9_c
Motif
Other DBs
NCBI-ProteinID:
UPU37997
LinkDB
All DBs
Position
2306081..2307430
Genome browser
AA seq
449 aa
AA seq
DB search
MSVKQTASFVLFSVTLLCSFLVFPRSALAADLLHYYNLALSKDPQLRGAEYRSLATVETL
QQAYAGVLPKIYGFAGYTHTFQDVRSSQNSVYVVGTIDYPTRFYGAALSQPLFRYSSYLS
IGQAKRLLQRSELELEKARQDVTLRVVEAYMNILLYQDRLAAIKAEETAVELHHTLARAR
FETGLAPVTDAYDAEARLAAVKAQRGEAQYLLQDAFQALVEICGERVQEVRPLKDDIPMP
LPFPQGGAFWLEAARRKNLELRIQKENAEVARREVRLRESAHYPTLDFQADYNQSVTRGS
LFGLGSNTVIWNAMVRLNIPLYEGGMTSSRTREAAHLLQGALQEVEGASRAVERKTSAAY
NDIVSAATRAEAMKKSVSAQTLVVEGKEEGFRSGMYTSIAVLDAMQDLYRYRREYSLARR
DYILSSLRLKQVTGTLTGEDVGLINQWLQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtaaagcaaacggcgtcgttcgtccttttttcagtgaccttgctgtgctccttc
cttgtttttcccagatccgccctggcagccgatcttcttcactactacaatttggccctc
agcaaagacccgcagcttaggggcgccgagtaccggtccctggcaacggttgagacgctg
caacaggcgtacgcgggggtgctgccgaagatatacggtttcgccgggtacacccacacc
ttccaggatgtaaggagttcccaaaacagcgtctacgtcgtggggacgatcgactacccg
accaggttctacggtgctgcgctctcccagccgctcttccggtattcctcctacctcagc
atcggtcaggcaaaaaggttgctgcaacggtccgaactcgagctcgaaaaggcacggcag
gatgtgaccctcagggtggtcgaggcctacatgaacatcctgctctaccaggacaggctt
gcggcgatcaaagccgaagagaccgcagtcgaactgcatcacaccttggccagggcgcgt
ttcgagacgggacttgcgccggtgacagacgcctacgatgccgaggcgcgtctggccgcc
gtcaaagcccagcggggcgaggcccaatatctgcttcaggacgccttccaggcgctcgtg
gagatctgcggcgagcgggtccaggaggtcaggccactgaaggacgacatccccatgccc
ctccctttcccccaggggggggcgttctggctggaggctgcacggaggaagaacctggag
ctccgcatccagaaggaaaacgcggaggtggcacggcgcgaagtccggctgcgggaatcg
gcccactacccgaccctcgatttccaggccgactacaaccagagcgtcacgcggggctca
ctctttggccttgggagcaacacggtcatctggaacgccatggtcaggctcaacatccct
ctgtacgaaggggggatgacgtcttcacggacaagagaggccgctcacctgctccagggc
gccctccaggaggtggagggggcgagccgggcggtcgaacgcaagaccagcgcggcgtac
aacgacatcgtcagcgccgcgaccagggccgaggcgatgaagaaatcggtcagcgcgcag
acgcttgtggtggaagggaaggaagagggtttccgctcagggatgtacaccagcatagcg
gtactggacgccatgcaggacctgtacaggtatcgaagagagtactcgctggcgcgacgc
gattacatcctgagttctcttaggctgaaacaggtgacggggacgctgactggcgaggac
gtagggctgataaaccagtggttgcagtga
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