Garra rufa (doctor fish): 141295579
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Entry
141295579 CDS
T11039
Symbol
hadhab
Name
(RefSeq) hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b
KO
K07515
enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase [EC:
4.2.1.17
1.1.1.211
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00062
Fatty acid elongation
grf00071
Fatty acid degradation
grf00280
Valine, leucine and isoleucine degradation
grf00310
Lysine degradation
grf00380
Tryptophan metabolism
grf00410
beta-Alanine metabolism
grf00640
Propanoate metabolism
grf00650
Butanoate metabolism
grf01100
Metabolic pathways
grf01212
Fatty acid metabolism
Module
grf_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
grf_M00085
Fatty acid elongation in mitochondria
grf_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
141295579 (hadhab)
00650 Butanoate metabolism
141295579 (hadhab)
09103 Lipid metabolism
00062 Fatty acid elongation
141295579 (hadhab)
00071 Fatty acid degradation
141295579 (hadhab)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
141295579 (hadhab)
00310 Lysine degradation
141295579 (hadhab)
00380 Tryptophan metabolism
141295579 (hadhab)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
141295579 (hadhab)
Enzymes [BR:
grf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.211 long-chain-3-hydroxyacyl-CoA dehydrogenase
141295579 (hadhab)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
141295579 (hadhab)
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Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF7337
F420_oxidored
Motif
Other DBs
NCBI-GeneID:
141295579
NCBI-ProteinID:
XP_073682915
LinkDB
All DBs
Position
21:complement(33384556..33399777)
Genome browser
AA seq
763 aa
AA seq
DB search
MAGVRALGSLSRLTTRRYTLFPGVTRRTFRVAACMMARTHVNYEIKGDVAVVRMNDPNAR
VNTLSVQMQREMTEVMDEIWGNNAVQSVVLISSKPGSFIAGADISMIQACKSAEEVTRLS
QEGQRMFEKIEKSPKPVVAAINGSCLGGGLEFAIACQYRIATKSKKTVLGCPEVMLGLLP
GAGGTQRLPKMVGIPSGFDMVLTGRSIRPDKAKKMGLVHQLVDTLGPGLKSPEERTIEYL
EEVAVEAARGLAKKQIPLTKEKGLMQKIQDYVMSYPFVRQQIYNTVQNKVMKQTKGLYPA
PLKIIECMKTGLEQGPTAGYLAEAQNFGKLAMTSESKALIGLYHGQVTCKKNRFGTPQKE
VKTLAILGAGLMGAGIAQVSVDKGIHTILKDTTVEGLSRGEQQVYKGLNDKTKKKSMTTF
ERDSFLSNLTGQLDYNGFNKADMIIEAVFEDLNIKHKVLKEVEAVIPPQCIFATNTSALP
IKDIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTDKTSKDTTASAVAVGLKQGKVIIVVG
DGPGFYTTRCLAPMLAEAVRVLQEGVDPKKLDSLTTGFGFPVGAATLADEVGIDVAAHVA
EDLGKAFGSRFGGGNIEFLKSMVDQGFKGRKSGKGCYIYQPGLKRRDVNPEALEILESYK
LTPNAAVSSDSDIQYRLVSRFVNEAVLCLQEGILANPVEGDIGAVFGLGFPPCLGGPFRF
VDSFGADKLVEKMRKFEEVFGNQFTPCQLLLDHAKDPSKKFHK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgtacgagccctcggttccctctccagacttacaaccagaagatataccctg
tttccaggtgtcacgagacggacctttagagttgctgcttgtatgatggctcgtacacat
gtgaactatgagatcaagggagatgtcgctgtggtccgcatgaatgaccccaatgcacgg
gtcaacacactgtcggttcagatgcaaagggagatgacagaagttatggatgagatttgg
ggaaacaatgcagtccagagcgttgttctcatctcatccaaacctggcagctttattgca
ggggcagacattagcatgattcaggcctgtaagtctgcagaggaggtcactagactttct
caagagggccagaggatgtttgagaagattgagaagtctcctaagcctgttgtcgctgcc
attaatggatcatgccttggtggaggcttagagtttgctattgcctgtcaatacagaata
gccactaagagtaagaagacggttctgggctgtcctgaggtcatgcttggccttcttcct
ggagctggaggaacacagagactgcccaaaatggttggtattcccagtggctttgatatg
gtgctaacaggacggagcatccgcccggataaagccaagaaaatgggactggttcaccag
cttgtggatactcttgggcctggattgaagagtccagaggagaggaccattgaatacttg
gaggaagtagctgtggaggctgccagaggacttgctaagaagcagatcccacttaccaaa
gaaaagggcttgatgcagaaaattcaagactatgtaatgagttacccgtttgtaaggcag
cagatctacaatacagttcagaataaagttatgaaacagaccaagggactgtaccctgca
ccactgaaaataattgaatgtatgaagactggtctagaacagggtccgactgcaggttat
ctggccgaggcacagaattttggcaagttagccatgacctctgagtctaaagcacttatt
ggcctttaccacggtcaggtcacatgcaagaagaatcgattcggaacccctcaaaaggaa
gtaaaaacacttgctatcttgggagcagggctgatgggtgctggcatcgctcaagtgtct
gtagataaaggcattcacaccattcttaaggacactacagtggagggactcagtcgtgga
gagcagcaagtctataaagggctaaatgacaagacaaagaagaagagcatgacaacattc
gaaagggacagtttcctgtccaaccttactgggcagcttgactacaatggctttaataaa
gctgacatgatcattgaagctgtttttgaagacttgaacatcaaacacaaagtcctaaaa
gaagttgaagctgtgatccctccacaatgtatatttgctaccaacacatctgctttacca
atcaaagatattgcagctgtcagcaagcgacctgaaaaggtaatcggaatgcactacttt
tctccagtcgacaagatgcagctacttgagatcatcaccactgataaaacctccaaggac
acaacagcctcagcagtggctgttggcttaaagcaaggcaaagtcattatcgttgttggg
gatggaccaggtttctacaccaccagatgtttagctcccatgttggcggaggcagtgcgt
gtgttgcaggaaggtgttgaccccaagaagctggattccctgaccacaggctttggcttc
cctgtgggtgctgctaccctggctgatgaagtgggcattgatgtggcagctcatgtggct
gaagacctcggcaaggcctttggctccagatttggagggggaaatattgagtttttgaag
agcatggtggaccaaggatttaaaggccggaaatcaggcaagggctgctatatctaccag
ccaggacttaaacgcagagatgtgaacccagaagctctggagattttggaatcatacaag
ctgacgccaaatgctgcagtatcttcagactcagatattcagtacaggttggtgtcccgt
tttgtgaatgaagctgttctgtgtttgcaagagggaatccttgccaatccagtggagggt
gacattggagccgtgttcggtctcggctttcctccctgccttggaggacccttcaggttt
gtggacagctttggtgcagacaaacttgtggagaagatgcgaaagtttgaggaggtcttt
gggaaccagtttacgccttgtcagctgctgctcgatcacgccaaggatccaagcaagaaa
tttcacaagtga
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