Garra rufa (doctor fish): 141341095
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Entry
141341095 CDS
T11039
Name
(RefSeq) lactase/phlorizin hydrolase-like
KO
K01229
lactase-phlorizin hydrolase [EC:
3.2.1.108
3.2.1.62
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00052
Galactose metabolism
grf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
141341095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
grf03110
]
141341095
Enzymes [BR:
grf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.62 glycosylceramidase
141341095
3.2.1.108 lactase
141341095
Chaperones and folding catalysts [BR:
grf03110
]
Intramolecular chaperones
Others
141341095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_1
Cellulase
Motif
Other DBs
NCBI-GeneID:
141341095
NCBI-ProteinID:
XP_073702340
LinkDB
All DBs
Position
8:complement(42769340..42778677)
Genome browser
AA seq
1903 aa
AA seq
DB search
MMKVLEGFLSLGLLVVFWNYSYAEQQDFLLLAGPLTTSQISPSDEDNVFTCEGPMPQQSR
AHFLYLQSRGVTHFKVPLSWSHILPSGDPNQPHEDTVKCYKMLVQQLTESGIKPLLVLHH
SAVPELFKDKYGGWENPLLVQMFEQYAGFVFNTFRDLVETFITFSHLHELHEVQLQNAVQ
CHANVYNVYHQIFKALQLSLGIRASDINSIYQMGPKIMEYVDFISLHMQYNCKLETPLTE
ELRKLQIGSGQKPILMYQLTVKDCDKYQDYFQPLHAIFGVLQNKDLHIMGCDITHVFENL
DQEETLKSLQVENTKTVSKNSASALSYQTVWEKFKNQTEGDRDQFLIGSFPVGFEWSISS
ESFKVEGGWAEHGKGETIWDRFSHEGHVFENQTADLACDSYHKVDYDVYLLRGMMTPNYQ
FSISWARIFPTGRKGSLVEKGVAYYDKMIDTILQSGIEPTVTLHHWDLPQALQDLGGWEN
DSIVEAFKEFSDFCFSHYGDRVKTWITFGSPWVVSNLGYGTGEHPPGVKDPTIASYKVTH
NILKSHAEAWHIYNDNYRTLQGGKVGIALNSDWAEPMNPSSDQDVAAAERYLNFMLGWFA
HPIFVDGDYPAVLKEQIEKKKDICGKELARLPVFTEAEKQRIQGTADFFGLNHHTSRLIS
ESLNSCDAGPNNVGDFKTDIDPTWPPTASDQIQSVPWGLRRLLNYISLEYTSITKVPIYI
TGNGMPTEYSGDVFNDTNRVDYLKTYINEAMKAVDLDGIGVQRFTVQSLMDGFEGPQGYS
QRFGLHYVDFDDPDRPRTPKTSLYYYSKVIEKNGFAETAAKAKIQMYGDKIEITRLPSLP
PSEVPSKSKIVWEKFSPQTKFERQLYHYGTFPEGFHWGVSSSAYQVEGGWNADGKGPSVW
DTFTQKPGNIPNNNNGDVACESYNKIDEDLNMLRALKVKTYRFSLSWSRIFPSGRTSSLN
QKGVDYYNRLIDGLIANNIAPMVTLYHWDLPQALQDIKGWDNPEMINIFNEYCDFCYATF
GDRVKFWITFNEPQTIAWSGYGLGQIPPNVKQPGDAPYRVAHNLLKAHAQAYHTYDEKYR
ASQGGLVTISLNAEWAEPLDISVPREVMAADRALQFQLGWFAHPIFKNGDYPDAMKWQVG
NKSELQGLTESRLPSFTDEDKAFIQGTADVFCINTYTIKVVHHVTSRLNIESYETDQDVE
KGDADGSENTAVKEQKAAAWGIRRLLNWLKEEYGDPEIYITENGVATGTAITVDDTDRIF
FLKTYVDEALKAHNLDGVRVKGYIATSLMDSFEWLKGYTVGYGLHYVNFKHSSRPRTPKR
SAHLYFDIMKNNGFPLPVEEEMIYGHFPEGFVWSTATASYQIEGAWRADGKGLSIWDKFA
HTALKISKDENGDIACDSYNKIDEDINSLKTMRVNHYRFSISWTRIMPDGTNSKINEAGL
NYYHRLLDALLAANIKPQVTLYHWDLPQALQDVGGWENDTIVERFRDYADVVFNSLGDKV
KFWITINEPYNVAMIGHGYGSAAPGISFRPGTAPYIVAHNLIKAHAEAWHLYNDKYRATQ
GGIVGITINSDWAEPRNPYKQEDLDAAVRVVQFQIGWFAHPVFNGDYSDLMKNIIQERSL
AAGRPQSRLPEFTPEEVARIKGTHDYFGFNHYTTVLAYNMDYKDLEHYDADRGAGTVADR
TWLDSGSFWLKVTPVGFRKILNFIKEEYGDPPIYITENGVSERESTTLNDVHRIHYYDNY
INQALKARLLDGVNVLGYAAWTLMDNFEWATGYDDKFGFFYVNRSDLTLQRIPKKSVWRY
ATIINCNGFISPGESPHECEIHEPEGEIPGTTPPPPPGEELLVSFLGLKVSGSDATLALN
VLFSLTVIAAVAVVLLVFGLVKASKKPKRPVEKDIDLDKADRF
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggtcctagagggatttctttctctaggtttgttggttgttttttggaactac
agttatgcagagcaacaggacttcttattacttgcaggccctctgaccaccagccagatt
tcaccttcagatgaagacaatgtgtttacctgtgaaggtccaatgccacaacaatccaga
gcccattttctgtaccttcagagcagaggggtgacccacttcaaagttcccctgtcctgg
tctcacatccttccctcaggtgatcctaaccagccgcatgaagacactgtgaagtgctac
aagatgcttgtgcagcagctgactgaatcgggcatcaaacctctgctggttctccatcat
tctgctgtaccagaactcttcaaagacaaatatggagggtgggagaatccattactggtg
cagatgtttgagcaatatgcaggatttgtgttcaatacatttagggatcttgtggaaaca
ttcatcacgttcagtcacctgcatgagctacatgaagtgcaacttcaaaatgctgtccag
tgccatgcaaatgtttacaatgtctatcatcagatattcaaagcacttcaattgtctctt
gggatcagagccagtgacattaactccatttatcaaatggggccaaaaatcatggaatat
gtggatttcatctctctgcacatgcagtacaactgcaaattggagacacctcttacagag
gaattgaggaagttacagattggcagtggtcaaaagcccatccttatgtatcagctgaca
gtcaaagactgtgataaatatcaagattatttccagccacttcatgccatttttggagtt
ttacagaacaaggatcttcacatcatgggctgtgacatcacacatgtttttgagaatcta
gatcaagaagaaacactcaaaagtttgcaggtggaaaatactaagacagtctcaaagaat
tcagcttctgcattgtcttatcaaacagtctgggagaaatttaaaaaccaaaccgaaggt
gaccgtgatcagttcttgattggttcgttcccagttggttttgaatggtccatctccagt
gagagtttcaaagtggagggtggatgggctgaacacgggaagggtgagaccatatgggac
cgatttagccatgagggtcatgtctttgaaaaccagactgctgatttggcctgtgatagt
tatcacaaggtggactatgatgtgtatctgcttaggggcatgatgacacctaattatcag
ttctcaatctcctgggctcgcattttccccactggacgcaaaggaagtttagttgaaaag
ggtgttgcttattatgacaagatgattgatacaatcctacaatctggcatcgagcccact
gttaccctccatcactgggaccttccccaagctctgcaggatttaggcggctgggaaaat
gactctattgtggaagctttcaaagaattttctgacttctgcttctctcattatggagac
agagtcaaaacatggatcacgttcggcagcccatgggtagtgagcaacttgggctacgga
acaggggaacatcccccaggagtgaaagacccaacaatcgcatcttacaaggtgacgcac
aatattctaaaatctcatgcggaagcttggcatatttataatgataattacagaacactg
caaggtggaaaagtgggcattgctcttaactctgattgggcagagccaatgaatccctca
agtgatcaggatgtagcagcagctgagcgttatttaaacttcatgctgggctggtttgct
caccctatatttgtagatggagactatccagccgtgcttaaggaacagattgagaaaaag
aaagatatctgtggtaaagagctggcaagacttcctgtcttcactgaggctgagaaacaa
cgaattcaaggcacagctgatttctttggacttaaccaccacacttcccgactgattagt
gagagcttgaatagttgtgatgctggaccaaataatgtcggggacttcaagactgatatt
gaccccacatggcctcccacagcttctgaccagatccagtctgttccatggggccttcga
agattattgaactacatctctttagagtacacgtccatcacaaaggtgcccatctacatc
accggaaatggaatgccaactgaatacagtggtgatgtgttcaatgacactaaccgtgtt
gactatctcaaaacttacattaatgaggcaatgaaagctgtggatttagatggaattggc
gtccagaggtttacagtccagtctctaatggatggatttgaaggtcctcaaggctacagt
caacgatttggattgcactatgtggactttgatgatcctgacaggccaagaacaccaaaa
acatcactatattactactcaaaagtgattgagaaaaatggatttgctgagactgctgcg
aaagctaagatacaaatgtatggcgataaaattgagatcacaagactccctagtctgcca
ccatctgaagttccttcaaaatcaaagattgtttgggaaaagttctcacctcagactaag
tttgagagacagctttatcactatggaacatttccagagggattccattggggtgtctcg
tcttcagcatatcaggtagaaggtgggtggaatgcagatggaaaaggaccaagtgtttgg
gatactttcactcagaaacctggtaatatcccaaacaataacaacggcgatgtggcatgt
gaaagttacaataaaatagatgaggatctaaacatgttgagggccctgaaagtgaagact
tacagattctccttgtcatggtctcgaatttttcccagcggccgtacatcttctcttaac
caaaagggggttgactactacaacaggctcatagatggtcttatagcaaacaatatcgca
cccatggtgactctctaccactgggacctgccacaggctttgcaggacatcaaaggttgg
gacaaccctgaaatgattaacatattcaatgaatattgtgacttctgctatgcaacattt
ggggacagggtgaagttttggatcacatttaatgaaccccagacaattgcatggtctgga
tatggactgggtcagattccacctaacgtgaagcaacctggagatgctccatacagggtt
gcacacaacctcctgaaagctcatgcacaagcatatcacacctatgatgagaaatacagg
gcatctcaaggaggtctggtaaccattagtctgaacgctgaatgggcagaacccctagac
atcagcgtccctcgagaggtaatggctgctgatcgagcccttcagttccagttaggctgg
tttgcacaccccatctttaaaaatggtgactaccctgatgccatgaagtggcaggttggg
aacaaaagtgaacttcaaggcttgacagaatccaggttgccttcttttactgatgaagac
aaagcctttatccaaggaacagctgatgtattctgcattaatacatacactatcaaagtt
gtgcatcatgtgaccagcagactcaatattgagtcttatgaaactgatcaggatgttgaa
aagggtgatgcagatggctctgaaaatacagctgttaaagagcaaaaggctgctgcttgg
ggaatcaggagacttcttaactggttaaaggaagaatatggagaccctgagatttacatt
acggaaaatggtgtggctacaggcactgccataacagttgatgacactgatcgaatattc
ttcctgaagacctatgttgatgaggctcttaaagcacacaatctggatggagtacgtgtc
aagggttacattgctacttctctaatggactcctttgagtggctgaaaggctacactgtt
ggttatggacttcactatgtgaactttaaacattcaagtcggccgagaactccaaagcgc
tctgctcatctctactttgatataatgaaaaataatggctttccactgccagtggaggaa
gaaatgatatatggacattttccagagggatttgtgtggagcacagcaaccgcttcctat
cagatagagggcgcatggagagctgatggaaaaggtctcagcatttgggacaaatttgct
catactgctttaaagatatcgaaggatgaaaacggtgacattgcctgtgacagctataac
aagatcgatgaggatatcaatagtctcaaaacaatgagggtcaaccactatcgcttttct
atttcatggaccagaattatgccagatggaacaaacagcaaaattaatgaagctggactc
aactactatcatagactactggatgctcttttggcagccaatatcaagccacaggtgact
ttgtaccactgggatctcccacaagcactccaggatgttggtggatgggaaaatgatacc
attgttgaaaggttcagagactatgctgatgttgtatttaacagtctgggagacaaagta
aagttctggatcactataaatgaaccctacaatgttgcaatgataggacatggctatgga
agtgccgcaccaggtataagtttcagaccaggcactgcaccatatattgtggcacacaac
ctcatcaaggctcatgctgaggcatggcatctgtataatgacaagtatcgtgcaacacaa
ggtggcattgttggcatcacaataaactctgactgggctgaaccaagaaatccatacaaa
caggaagatctggacgctgccgtgcgtgtagttcagttccagattggttggtttgctcat
cccgtgttcaatggagattacagcgatttaatgaagaacataattcaagagagaagttta
gcagctggccgaccacaatcaagacttccagaattcaccccggaggaagtagcgaggatt
aagggaactcatgattattttggattcaaccactacaccactgtcttagcctataacatg
gactacaaggacctcgagcattatgatgcagacagaggtgcaggaacagttgcggatcgt
acatggctggattctggatccttctggctgaaagtaactcctgtgggattccgaaaaatt
ctaaatttcataaaggaggaatatggagaccctcctatttacatcacggagaatggagta
tcagaacgagagtcaacgactctgaatgatgtccaccgaatccactactatgataactat
atcaatcaggccctgaaagcacgtttgctggatggtgtgaacgtccttggctatgctgcc
tggacactgatggacaattttgaatgggcgacgggttatgatgacaaatttgggtttttc
tatgtaaatcgatcagatttaactttacaacgtattcctaagaaatctgtctggcgctat
gctacaataatcaactgcaatggcttcataagcccaggagaaagtccacatgaatgtgaa
atccatgaacctgaaggtgaaatcccaggaactactcctccacctcctcctggtgaggaa
ctcttggtcagtttcttgggtttgaaagtgtcaggttctgatgctacactggctctcaat
gtcctcttcagtctcaccgttattgcagcggttgctgttgtcctcctggtttttggactt
gtcaaggcatccaagaaaccaaaacgtccagtagaaaaagacattgatctcgacaaagca
gataggttctga
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