Garra rufa (doctor fish): 141342294
Help
Entry
141342294 CDS
T11039
Symbol
adar
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04622
RIG-I-like receptor signaling pathway
grf04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
141342294 (adar)
04623 Cytosolic DNA-sensing pathway
141342294 (adar)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141342294 (adar)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
141342294 (adar)
Spliceosome [BR:
grf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
141342294 (adar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
LexA_DNA_bind
Motif
Other DBs
NCBI-GeneID:
141342294
NCBI-ProteinID:
XP_073702819
LinkDB
All DBs
Position
9:28121068..28146720
Genome browser
AA seq
1378 aa
AA seq
DB search
MSRGRGGFNKDCKRFSFPPQQGKPQYPSYATTGYPQGPRVPNPNSVSGSYPHPSFYSSRP
GVPGVPPRGRPFPPSPSNPPLWASPQHVSDQISDSNGVSFRQHQVQFLRGQSAQAPQFKA
PQQQGSQTSSQGEEVSTGPIHYQAAYRDFKTSGSNFGRRDGRGRGNWQREQNFRNTPGPK
RSPQWNHHLQKGQCYPNQYNKHYWNTQADEVSSGLHSLSLSDRVTRVDTSDTKVSSSPGS
VRESLYLTAEIQQQVLAFLTSLGPDETVQARVLGKKLGLPKGIVNKALYALLRTNQAVKQ
SEIPPLWRLYKVEDGELIKDTDQTKSSKDSEKKTVQKLYINQEAKEDLPSTSAPSASQVL
VEADSDSSDQSEDSEGEDTCKTTKTFLPVVQSVTLSTMADTKDSKEKIMQYLYEAGTGNA
LVIAKNLGLRSAKQVNPTLYALEKQGDVMRDTDVTPPTWSLSAHRQEKMDRQRKAAATAN
QDVNSAELLNFAAEGITNINEVFEFPGATAAEPMDAGENPLDVILDNSSFGNKQVDVPGL
EAVPPKPSELPSSTFHFFQPPPHQFSYYQDTASNGGERSQWASDDIPEFLNTIRSEVAVS
LAAPPAQNLETSRLQKLKEARSKNPVSGLMEFAQHSGHTCEFLLLDQSGPSHDPRFRMQV
MLDGRRFPAAEGPNKKVAKKDAAAMTLKILWRETEGADEEEEPSIEGAESTTDLADDMGG
TDTPPQALSRSLPGGKNPVSVLMEHSQRSGHPIQFIKTGQEGPPHDPRFMFRVKVGERLF
QEASAPSKKAARQLAAEEAVKELIGDGLLHLNKPPGTFCPLGDNESQPAIPACPSLPPLT
AAELQAAHEAGVGDLINHLNNNAVSGLLEYARARGFAAEIRLVGQSGPSHEPKFTYQAKL
GGRWFPAVCASNKKQGKQEAADAALRVLIGEAEKAARTGELTPELPVSGSTMHDQIAMLS
HQRFNALTARIQHSLLGRKILATIVMRKGSDTLGTVVSLGTGNRCVKGEELSLRGDTVND
CHAEIISRRGFIRFLYGELMKHWESPGDESIFEVADDGKLKIKSHITFHLYISTAPCGDG
ALFDKSCSEAAELNGSQHMPLFENVKQGKLRTKVENGEGTIPVESSDIVPTWDGIQHGER
LRTMSCSDKILRWNVLGLQGALLTHFIHPVYLRSITLGYLYSHGHLTRAVCCRLARDGDA
FKKSLPASFTLNHPEVGRVSVYDSTRHTSKTKESSVNWSQPDQFTVEVLDGTKGKLDSLK
MDVSRVSKSNLFRLFHTLCQRAGRADLLALPSYAHAKMAATSFQDAKRLFFLALNQHGYG
SWIGKPLEEKSFEGEAGSSELGGISGGAQALCPPGCTVDPISCLGSDNNNFNSAAQGF
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggtagaggagggtttaataaagattgcaagcgattctccttccctccccaa
cagggaaaacctcaatatccctcttacgcaaccactggttacccacagggccctcgtgtc
ccaaatcccaactctgtatctggcagctatccgcacccctccttttactccagtcgcccg
ggtgtccctggcgtgcctccacgtggtcgtcctttcccccctagcccctcaaatccaccc
ctgtgggcatccccccagcacgtcagtgatcagatctctgactcgaatggtgtaagcttc
cgccaacaccaggtgcagttcctcagggggcagagtgcacaggctccacagttcaaagca
ccccagcagcaagggtcccaaacctccagccaaggggaagaggtctctactgggcctatc
cactaccaagcagcttatcgtgacttcaaaacaagtggtagcaattttggaagaagagac
ggcagaggcagaggaaactggcaaagagagcagaacttcagaaatacacctggacctaag
agaagcccacagtggaatcaccatctccagaagggacagtgttatcctaatcaatacaat
aagcactactggaatacacaggcagatgaggtttcctcaggcctccatagtctgagttta
agtgaccgggtaacaagggtagacacctctgacaccaaagtttccagttctcccggctcg
gttagagagtctctgtatttgaccgctgagatccagcaacaagtccttgcttttttgaca
tcactcgggccagacgagacagttcaggccagggtcttgggtaaaaagctcggccttcca
aagggaattgttaataaggctttatatgccctgttaaggacaaaccaagcagtgaaacaa
agtgagattcctcctctgtggagactctacaaggtagaggacggtgagctaatcaaagat
acagaccaaaccaagtcctcaaaggattctgagaaaaaaacagttcaaaagttatacata
aaccaagaggctaaagaggatctccccagcactagtgctccctctgcatcacaggtccta
gttgaggctgacagcgattcctctgaccaatcggaggactctgaaggtgaagatacctgt
aaaacaacaaagacttttttaccagttgtccagtcagtaaccttgtcaacaatggctgat
actaaagatagcaaagagaagatcatgcagtacctctatgaagcaggtacaggcaatgcg
cttgtgattgccaagaaccttggcctgcgaagtgccaagcaggtcaatcccacactctat
gccttggagaaacaaggtgacgtaatgcgtgacaccgatgtaacaccgcctacctggtcg
ctaagtgcgcaccggcaggaaaagatggaccgccaacgaaaagctgctgcaactgcaaat
caggatgttaacagtgcagagttgttgaactttgcagctgaagggatcacaaacataaat
gaggtatttgagtttccaggagctaccgcagctgagccgatggatgcgggtgaaaatcca
ttggatgtgattttagacaacagctcgtttggtaacaaacaggttgacgtgcctggcctt
gaggcggtaccacccaaacccagtgaacttccctcatccaccttccactttttccaacct
cctccccaccagttctcctactatcaggatacggccagtaatggaggagaacgctcacag
tgggcatctgacgatattccagaattcctgaacacgatccgctccgaggttgctgtttcg
ttggctgctcccccagctcaaaacctggagacaagcagattgcagaagctgaaagaggcc
cgcagtaagaacccagttagcggactgatggagtttgctcagcactctggacacacttgt
gaattcctacttctggaccagtctggaccttcacatgaccccaggtttcggatgcaggtc
atgttggatggtcgtaggtttccagcagctgagggtccaaacaaaaaagtggccaaaaaa
gatgctgcagccatgaccctaaagattctttggagggagacggagggagcagatgaagag
gaggaaccgagcattgagggagctgagtcaaccactgacctggcagatgatatgggtggt
acggatactccgccccaggctctgtctcggtctctacctggaggaaagaatcctgtatct
gtcctgatggagcacagtcaacgcagtgggcatcccatccagtttatcaagacaggacag
gaaggaccaccccatgatccacggtttatgttccgtgtaaaggttggggagcgtctcttc
caagaagcctcagcacccagtaagaaagctgcaaggcagctagcagcggaggaggccgtg
aaagagctgataggagatggactactacatcttaacaagcctccaggtactttctgccct
ctgggagacaatgagtctcagccggcgattcctgcatgtccctcgctgcctcctctgaca
gcagctgagctccaggcggcccatgaagcaggtgtgggtgatcttatcaaccacctgaac
aacaacgctgtgtctggcctgctcgagtacgcccgtgctcgaggcttcgctgccgagatc
cgtctggtgggccagtccggaccctcgcacgagcccaagtttacataccaagctaaattg
ggagggcggtggtttcctgcagtttgtgctagtaataaaaagcaggggaagcaggaggca
gcggatgctgctcttcgagtgctcattggagaagcggagaaagcagcacgtactggagag
ctcacgccagagctgccagtgtcagggagtaccatgcatgaccagattgccatgctaagc
catcagcgctttaatgcactcacggcgcgcatccagcacagccttctgggtaggaagatt
cttgccaccattgtgatgcggaaaggatcagatactcttggaacagttgtcagccttggg
acaggaaaccgctgcgtgaagggagaggagcttagtcttcgaggggacaccgttaatgac
tgccacgcagaaatcatctccaggagaggctttatccggtttttgtacggtgagttgatg
aagcattgggaaagccctggtgatgagagcatttttgaagtggcagacgatgggaagctg
aagatcaaatctcacatcacctttcatctgtatattagcactgctccatgtggcgacggc
gctctgttcgataagtcgtgcagcgaggccgccgaattaaacggctctcagcatatgcct
ctcttcgagaacgtaaaacagggcaagctcagaaccaaggtggagaacggcgagggcacc
atcccagtggagtccagtgacattgtgcccacttgggatggcattcagcatggtgagcgc
ctgaggaccatgagctgcagtgacaagatcctgcgctggaatgtgctcggcctgcagggg
gcgctccttacccacttcatccacccagtgtatttgcgctctatcactcttggatatctc
tacagccacggtcacctgactcgtgcagtatgttgccgattggctagagacggggatgcg
ttcaaaaagagtttaccagcaagcttcactctcaaccaccctgaggtgggcagggtgagt
gtgtatgactcgacacgccacacaagcaagaccaaagagtccagtgttaactggagtcaa
ccggaccagttcaccgtggaagtgctggatggcaccaagggcaaactagacagtctcaaa
atggacgtatcgcgggtttccaagtccaatctgttccgtctcttccacactttgtgccag
cgtgcaggccgtgccgatctgctggcactaccgtcctacgcccacgctaagatggccgcc
acttcattccaggatgccaagaggctgttcttcctggcgctgaaccaacatggatatggc
tcatggatcgggaagcccttggaagagaaaagttttgagggagaagccggaagctctgag
ctagggggaataagcgggggcgcacaggctctgtgccctccgggttgcactgttgacccc
attagctgcttgggctcagacaacaacaacttcaactcagcagcacagggtttttag
DBGET
integrated database retrieval system
