Geotrypetes seraphini (Gaboon caecilian): 117350477
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Entry
117350477 CDS
T09159
Symbol
ADAR
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase isoform X1
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04622
RIG-I-like receptor signaling pathway
gsh04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117350477 (ADAR)
04623 Cytosolic DNA-sensing pathway
117350477 (ADAR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117350477 (ADAR)
Enzymes [BR:
gsh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
117350477 (ADAR)
Spliceosome [BR:
gsh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117350477 (ADAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
FaeA
Motif
Other DBs
NCBI-GeneID:
117350477
NCBI-ProteinID:
XP_033780662
UniProt:
A0A6P8NW74
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All DBs
Position
16:complement(28147158..28215380)
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AA seq
1156 aa
AA seq
DB search
MSEKKSKEFALDQLRHQQVQFLLGGCTETPVSSGPVQRSPAFQYSTRVHPPTAQNLSRSG
HHNWPEGRGSFKKHQAQTLSYGYLSQSYYKNLEKSVDELSLNVQNLAVRDYEEEIIRFLK
EFAQNKSQSAIFIARHLKTQKSEINRHLYKLHREGRLYKEGDRPPYWRIRKDTEVAEQSS
RVVGRKTNSKIHLFEYNSLDSKKSAVNCSEDNLEFDMSEMKEKILDYLFDSPESTSNSIA
KNIGLIGTNTRQVNHVLYNLEKQGDVYRQGTAPPKWSLSDKKRERMQMKKKASEAPDEEE
EIVAAVVCTEMPDTVENEAMGEDLNVGNEGMWEELNVGNEAMGEELNVGREAMGEELNVG
IEAMREELNVENVESAREEVISSVLGKRPRKIRFLKKSNYDNFENGKWATDEIPEDLNSI
NKETDEMQSIMEGPSDEFESGQEMSHLDKLTACLEKNPVSGLIEFSQYSSQHCEFVLLNQ
SGPSHDPRFKFQAVVNGRKFPAVEASSKKIAKKEAAAIALKILLREAEGGPETEEVEMSE
AAQVDAEPGVQQMLSSGKNPISILMEHSQKSGNACEFQLLSQEGPAHDPKFTYCAKIGDQ
TYPTVVANSKKLAKLMAADAAVRVLRGDSATIQYPEKPLVEGQSLDSSILISEVPELTQE
ELKAAKTTSVGELIKYLNTNPVSGLLEYSRANGFAAEFKLVDQSGPPHDPKFVFQAKVGG
RWFPAVSAHNKKQAKQEAADAALRILIGEAEKAARTGESITELPVSGSTTHDQLAMLSHQ
RYNSLTACIQHSLLGRKILAAIIMKKGAEDLGTVVSIGTGNRCVKGEELSLKGETVNDCH
AEIISRRGFIRFLYSELMKVDSSASEDSLFETAGDGRLKLKSGITFHLYVSTAPCGDGAL
FDKSCSDPPSTEGDNTHHPLFENPKQGKLRTKVENGEGTIPVESSDIVPTWDGIQHGERL
RTMSCSDKILRWNVLGLQGALLTHFLEPVYLHSVTLGYLYSQGHLTRAVCCRMSRDGDTF
KQNLPPLFTVNHPEVGRVSVYDSTRQTGKTKESSVNWCLADDVSVEVLDGTKGKIDGPKL
DVSRVSKQSILTLFKELCKKAGRHDLLKYSTYSEVKHAALDYQAAKEHFFKTVEEMGYGS
WICKPEEEKSFSLVIE
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaagaaatctaaggagtttgctcttgaccaactgagacaccaacaagtgcag
ttccttttaggagggtgtacagagactccagtgtcttcaggcccagtacagagatcacca
gcatttcaatatagcacaagagttcatccaccaactgcgcagaatctgtcaagaagtggt
caccacaattggccagaaggaagaggatcttttaaaaaacaccaagcccagactttgtca
tatggttacttgtctcagagttactataaaaatttagaaaaaagtgtggatgagctttct
ttaaatgttcagaaccttgcagtgagagattatgaggaagagatcataaggtttttaaaa
gaatttgctcagaataaatcacagtcggctattttcattgcccggcatcttaaaacccag
aagagtgagatcaatcgtcatctttacaaactgcatagagagggcaggttatataaagaa
ggcgatagacccccatattggagaattagaaaagacacagaagttgcagaacagtcatcc
agagttgtgggtagaaaaaccaattctaaaatacacttatttgagtacaattcccttgat
tctaaaaaatctgctgtaaactgctcagaagataatctagagtttgacatgtctgagatg
aaggagaaaatccttgactatttgtttgatagtccagaatcaacatcaaatagcattgcc
aaaaacattgggttgattggtacaaatacaagacaagttaatcatgttctgtataacctg
gaaaaacagggagatgtctacaggcagggtacagcccccccaaaatggtctctctctgac
aagaaacgagagagaatgcagatgaaaaagaaggcaagtgaagcaccagatgaggaagaa
gagattgtggctgcagttgtctgcactgaaatgccagacactgtggaaaatgaagccatg
ggggaggacctaaatgtgggaaatgaaggcatgtgggaggagctaaacgtgggaaatgaa
gccatgggagaggagctaaatgtgggacgtgaagccatgggggaggagctaaatgtggga
attgaagccatgagggaagaactaaatgtggaaaatgtggaatctgcgcgagaggaagta
atcagtagtgttctaggtaaaaggccacgtaagatacgttttttaaagaaatcaaattac
gataactttgaaaatggcaagtgggccactgatgaaattcctgaggacttgaacagcata
aataaagagacagatgagatgcagagcattatggagggtccctcggatgaatttgaaagt
gggcaagagatgtctcatctggataagttaacggcttgcctggagaagaacccagtgagt
ggtcttattgaattctcccagtattcttctcagcactgtgaattcgtcctcctgaaccaa
tctggaccatctcatgacccaagatttaaattccaggctgttgtcaatggaagaaagttt
ccagctgtcgaagcgagcagtaagaaaatagccaagaaagaagcagccgccatagccctg
aaaatcctcctccgtgaagcagagggtggccctgagactgaggaagtagaaatgtctgaa
gcagctcaggtagatgctgagcctggagtacagcagatgctttcctctgggaagaatcct
attagcattttaatggagcatagccaaaaatcaggcaatgcgtgcgagtttcagctttta
tctcaagaaggaccagcccacgatccaaagttcacgtactgtgcaaaaataggcgaccag
acatatcccacggtggttgcaaacagtaagaagctggcaaaactaatggcagcagatgca
gctgtcagggtactccgtggggactctgcaacaatccagtatcctgaaaagcctcttgta
gagggtcagtccttggatagttccattctgatttctgaggtgcctgaactgactcaagaa
gaactaaaagcagcaaagacaacaagtgttggtgagctcatcaagtacttgaacacaaat
cctgtgagtggcctgttggagtactcacgtgccaatggatttgctgctgagttcaaattg
gttgatcagtctggaccaccccatgatcccaaatttgtctttcaagctaaggttggagga
cgttggttcccagctgttagcgcacataacaaaaaacaagcaaaacaagaagcagcagat
gcagcacttcgaatactgattggagaagcagagaaagcagcccgtactggagaaagcatc
actgagcttccagtatctggcagcacaacacatgatcagctggccatgctgagccaccaa
cgttacaactcgctaactgcatgcattcagcacagcttattaggaaggaagatcttggct
gccatcatcatgaagaagggagcagaggacctgggcactgtggttagcattggcactggt
aatcgctgtgtgaaaggggaagagttgagtctaaaaggagaaacagtaaatgattgtcat
gcagaaatcatttcccgtagaggcttcataaggttcctttacagtgagctgatgaaggtt
gactcatctgcatctgaggacagcctatttgaaactgcaggggatggcagactgaagttg
aaaagtggcataacctttcacctttatgtcagcacggctccctgtggtgatggcgccctt
tttgataagtcttgcagtgaccctccatccacagaaggagacaacacacatcacccactt
tttgagaacccaaagcagggtaaacttcgcactaaggtggagaatggagagggcactatt
ccagttgagtccagtgacattgtgccaacatgggatggaattcagcatggagagagattg
cgcactatgtcttgtagtgataaaatcctgcgttggaatgtcttaggtctacagggggca
cttctgacacatttcctggagcctgtctatctccactcagtcactctcggctatttgtac
agccagggtcatctgacgcgtgcagtttgctgtcgtatgtcaagagatggtgatactttc
aagcagaatcttcctccattattcacagtaaaccatccagaggttgggcgtgttagtgtg
tatgattctaccaggcagactggcaagaccaaggaatcaagtgtgaattggtgtcttgct
gatgatgtcagtgtagaagttttggatggaacaaaaggcaaaattgatggaccaaagctt
gatgtttccagagtgtccaagcaaagcattctcaccttgttcaaagagctttgcaaaaaa
gcaggcagacatgacctgctaaagtattcaacttatagtgaagtgaagcatgcggccctg
gactaccaggctgctaaagaacacttcttcaaaactgtagaggagatgggttatgggagc
tggatatgtaaacccgaagaagagaagagtttttctcttgttattgaataa
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integrated database retrieval system
