Geomonas subterranea: KP001_14455
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Entry
KP001_14455 CDS
T07936
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
gsub
Geomonas subterranea
Pathway
gsub01501
beta-Lactam resistance
gsub01503
Cationic antimicrobial peptide (CAMP) resistance
gsub02020
Two-component system
gsub03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KP001_14455
09132 Signal transduction
02020 Two-component system
KP001_14455
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KP001_14455
01503 Cationic antimicrobial peptide (CAMP) resistance
KP001_14455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsub02000
]
KP001_14455
02044 Secretion system [BR:
gsub02044
]
KP001_14455
01504 Antimicrobial resistance genes [BR:
gsub01504
]
KP001_14455
Transporters [BR:
gsub02000
]
Other transporters
Pores ion channels [TC:
1
]
KP001_14455
Secretion system [BR:
gsub02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
KP001_14455
RTX toxin transporter
KP001_14455
Multiple protein transporter
KP001_14455
RaxAB-RaxC type I secretion system protein
KP001_14455
Antimicrobial resistance genes [BR:
gsub01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
KP001_14455
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
KP001_14455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QXE89635
LinkDB
All DBs
Position
3319667..3321004
Genome browser
AA seq
445 aa
AA seq
DB search
MITNALKLLTVSLLLALAGRQACAQDSPPLALSLDQAITRGLETNLNAVLARSRVNEAEG
TRERRVAGYLPHLRIETPFAWQTRNLRAQGISLPNSPAVVGPFTSYDFRIYGEQNILDLQ
SYHAIRAAEQEKKARLDDYLDARGEVIRLVTVQYLNAAYAEARVATARSRVQTSEALEKL
ARDQRAAGVADGLDVLRAQVQLANDRQNLQVTGNNAQLALLALARSVGIDLGTPITLTDK
LAFKPLEPPRIEQGIEAALESRPDYRSLFSQRASLEELVKASRSRYLPKIVVSGNYGTSG
QEVSSLDPSGMLQVNMVLNLFDYDRKGERLELESRLERNARQVADLKLGVEQDIRAALLT
LASATDQVATAREGAQLAERELQYAGDRFRNGVANNIEVVTAQEALARARDNELNALAQH
AEAKIALARALGDTEKVYRLFLGIE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaaacgccttgaaactgttgaccgtatccctcctgctggctctggcggggaga
caggcgtgcgcccaggactcccctcccctggcgctgtcgctggaccaggccatcacccgc
gggctggagacgaacttgaacgcggtgctggcgagatccagggtgaacgaagcggaaggg
acgcgggaacgcagggtggccggttacctcccgcacctgcgcatcgagacgccgttcgcc
tggcagacccgcaacctgcgcgcccaggggatcagcctccccaactccccggccgtggtc
ggtcccttcaccagctatgacttccgcatctacggcgagcagaacatcctcgacctgcag
agctaccacgccatcagggcggccgaacaggagaaaaaggcgcggctcgacgactacctg
gatgcgcgcggcgaggtgatccggctggtcacggtgcagtacctgaatgccgcctacgcc
gaggcccgggtggcgacggcgcgaagccgggtgcagacctcggaggccctggagaaactg
gcccgggaccagcgcgcggccggggtggccgacggcctggacgtgctgcgcgcccaggtg
cagcttgccaacgaccgccagaacctccaggtgaccgggaacaacgcgcaactcgccctg
ctcgccctggcccgcagcgtcggcatcgacctgggcacccccatcaccctcaccgacaag
ctcgccttcaagcccctggaaccgccgcggatcgagcaggggatcgaggccgcgctggaa
agccgccccgactaccgctcgctcttttcccagcgcgcctccctggaggagctggtgaag
gcctcccgctcgcgctacctcccgaagatcgtggtgagcggcaactacggcaccagcggc
caggaggtgagcagcctcgatccgagcgggatgctgcaggtcaacatggtgctgaacctg
ttcgactacgaccgcaagggtgagcgcctggaactggagagccgcctcgagcgcaacgcc
cggcaggtggccgacctgaaactcggggtggagcaggacatccgcgcggccctgttgact
ctggcttccgcgactgaccaggtggccaccgcgcgggaaggggcgcagctcgccgagcgc
gaactgcagtacgccggcgaccgcttcagaaacggggtcgccaacaacatcgaggtggtc
acggcgcaggaagcgctggcgcgggctcgcgacaacgagctcaacgcgctggcgcagcac
gccgaggcgaagatagcgctcgcccgcgccttgggcgacacggaaaaggtgtaccggctg
ttcctgggcatcgaataa
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