Halomonas sp. BDJS001: OM794_06590
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Entry
OM794_06590 CDS
T10426
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
habd Halomonas sp. BDJS001
Pathway
habd01501
beta-Lactam resistance
habd01503
Cationic antimicrobial peptide (CAMP) resistance
habd02020
Two-component system
habd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OM794_06590
09132 Signal transduction
02020 Two-component system
OM794_06590
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OM794_06590
01503 Cationic antimicrobial peptide (CAMP) resistance
OM794_06590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habd02000
]
OM794_06590
02044 Secretion system [BR:
habd02044
]
OM794_06590
01504 Antimicrobial resistance genes [BR:
habd01504
]
OM794_06590
Transporters [BR:
habd02000
]
Other transporters
Pores ion channels [TC:
1
]
OM794_06590
Secretion system [BR:
habd02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
OM794_06590
RTX toxin transporter
OM794_06590
Multiple protein transporter
OM794_06590
RaxAB-RaxC type I secretion system protein
OM794_06590
Antimicrobial resistance genes [BR:
habd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
OM794_06590
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
OM794_06590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
Ribosomal_L5
Motif
Other DBs
NCBI-ProteinID:
UZH11406
LinkDB
All DBs
Position
1437765..1439216
Genome browser
AA seq
483 aa
AA seq
DB search
MTRTPRFALSALALTVTLLSQTALAQSDVPADQQALSELEALANSESTSQALPSLPDLFS
RALRHDADLSRQRYELDATREEVPMARSQLLPQVSASGGYLWQDSSNSQTVDELNLTGDA
PRPAEIDETYYQVQLQQPLFSLERWRKMDVANAQVSAAELQLAVVEQELALQVSEAYIKA
YLASQRLGLLESQQASLELQVRQASRAFDLGVGNRVDLLEAQSRYDQAVSDAVEAENELD
NALSELERLTGVTPRFQSSAPGELTTVTLNGDIGNPDEWIPRTSQNLRVLLAQEEQQVAQ
ANTSVRRSGYYPEVNLTLSYSDRQSEDYLRESEDYRANVEVSVPIYRGGYTNASVRQGEK
RIEAGSAALDNERNLAIQEVRQRIRALNGGERRLEALNQAISSSQLFLEAAEKGEQLGLR
DLVDVLDARASLYDQRIQYVDTVGNYALDMLSLHTAVGSLESDDLNRIMSLLASLSTSSQ
VAR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgacacggacgccacgttttgctcttagtgcgcttgcactgactgtcacgctgttaagt
cagaccgcattagcacagagtgatgtgcctgctgatcagcaagcccttagcgaattagaa
gcgcttgccaatagcgagtcaacgtcccaagcgttgccctcactgcctgatctgttttcc
agggctctacgccatgacgcagatctttcacgtcagcgttatgagttggatgccactcgc
gaagaagtaccgatggcgcgttctcagcttctgccacaagttagtgcttcaggaggctat
ttatggcaggactcatcgaattctcaaacggttgatgagttgaacttgacaggggatgcc
ccgcgccctgctgaaatcgatgaaacctattaccaggttcagcttcagcaaccactgttt
agcctcgagcgttggcgcaagatggatgttgctaacgctcaggttagtgccgccgaatta
cagcttgccgtcgttgagcaagaattggcactgcaggttagtgaagcctatataaaagcc
tatttagcctcccaacgtttaggactcttagagtctcaacaagcttctcttgaactacag
gtacgccaagcgagtcgagcatttgatctaggtgttggtaaccgtgtggacttgctggaa
gctcaatcgaggtacgatcaggcagtatccgacgcagttgaagctgaaaatgagttagac
aatgcgcttagcgaattggaacgccttactggtgttacgccaaggtttcaaagttcagct
cctggtgagctgaccactgttaccctcaatggcgatattggtaatcccgacgaatggatt
ccacgcaccagccaaaacctaagggtattattagcccaggaagagcaacaagttgcgcaa
gctaatacaagcgttaggcgttcgggttattaccctgaggtaaacttaacgcttagctat
tcggatagacaaagtgaagattatcttcgtgaaagcgaagattaccgagccaatgtcgag
gttagtgtgccaatttatcggggcggctatactaacgcaagcgttcgccagggcgaaaaa
cgtattgaagcgggctcggctgctctggacaacgagcgcaacttagccatacaagaggtg
cggcaacggattagggctctcaatggcggcgaacgccgccttgaagctctcaatcaagcc
atctcatccagtcagctgtttttagaagctgccgagaagggtgaacaactgggattgagg
gatctagtggatgtgcttgatgcacgagcaagcctctatgatcagcgtattcagtatgtc
gacacagtcggtaactatgctttggatatgttgtcacttcacactgcagtgggtagctta
gaaagtgacgatcttaatcgcatcatgtcgctactggcctcgttgtccacttcatcgcag
gtagcgcggtag
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