Halomonas sp. R57-5: HALO3293
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Entry
HALO3293 CDS
T04029
Name
(GenBank) K03287 outer membrane factor, OMF family
KO
K12340
outer membrane protein
Organism
ham
Halomonas sp. R57-5
Pathway
ham01501
beta-Lactam resistance
ham01503
Cationic antimicrobial peptide (CAMP) resistance
ham02020
Two-component system
ham03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HALO3293
09132 Signal transduction
02020 Two-component system
HALO3293
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HALO3293
01503 Cationic antimicrobial peptide (CAMP) resistance
HALO3293
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ham02000
]
HALO3293
02044 Secretion system [BR:
ham02044
]
HALO3293
01504 Antimicrobial resistance genes [BR:
ham01504
]
HALO3293
Transporters [BR:
ham02000
]
Other transporters
Pores ion channels [TC:
1
]
HALO3293
Secretion system [BR:
ham02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HALO3293
RTX toxin transporter
HALO3293
Multiple protein transporter
HALO3293
RaxAB-RaxC type I secretion system protein
HALO3293
Antimicrobial resistance genes [BR:
ham01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HALO3293
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HALO3293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF5790
Surfac_D-trimer
Motif
Other DBs
NCBI-ProteinID:
CEP36975
UniProt:
A0A0D6EBM3
LinkDB
All DBs
Position
I:complement(3573066..3574535)
Genome browser
AA seq
489 aa
AA seq
DB search
MPKISLDTITVSAMQWRSLRLAAIVIALSILSPSIYAQQELRAGNAPAAELAALESHSTF
PVALPSLPELFARALENDADLLRQRYELEATREEIPMARSQLMPQVSATGSYLWQDSTNI
QTSPDDFGLDQRAQRPGEIDETLWQLQLQQPLFSLERWRGVGVANAQVSAAVLQLAVVER
DLALQVSEAYVQAYLASLRLGLLETQQTSLDLQVRQAQRAFDLGIGDRINLLEAQSRLDQ
AISDAVQAENELDNALSTLERLTGTLPEFHGLAVGELTDITLQSEWGEQEDWVMQAGRNL
NVLLAGQELRIAEENANVRRAGYYPEINLNLSYSDRQSDDQLRESEDYRASIEVSMPIYR
GGYTTASVRQGENRIDANKAAFDNQRNLAMQEVRQRLRSLKGHVRRIEAVKQAIASSQLF
LNAAERGEQFGLRDLVDVLDARASLYDQRIQYVDVIGEYALDSLALQSAVGELESNDLVA
TMSLLSSIQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaatatctctcgatacaataacggtaagcgccatgcagtggaggtcgctacgc
ctagcggctattgtgattgcgttgagtattttatctccgtcgatttatgcgcaacaggaa
ttacgagcgggcaatgcccccgcagcagagctggcggcgcttgaatcacattccacattt
cctgtggccctgccatccttgccagaactatttgcccgtgcacttgaaaatgatgccgac
cttttgcgtcaacgttacgaattagaggccacgcgtgaagaaattcctatggcgcgttca
cagttgatgccccaagtcagcgctaccggttcgtacttatggcaagactcgaccaatatt
caaacttcgcccgatgactttggtctcgatcaacgtgctcagcggcctggggaaattgat
gaaaccttgtggcagctacaattgcagcagcccctatttagcttagaacgctggcggggt
gttggcgttgccaatgcccaggtcagcgccgctgtcttacagctagcggtagtcgagcgc
gatctagcgctccaggtcagtgaagcctatgtgcaagcttatctagcctccctgcgtctc
ggcttactagaaacgcagcagacttcactagatttgcaagttcgccaagctcagcgagca
tttgatcttggtattggtgaccggataaatttactggaagcgcagtcacgcttagatcaa
gcaatatcagacgccgttcaagcagaaaatgaactggataatgctctcagcactctagag
cgtttaaccggcacgctgcccgagttccatggcctagccgttggcgagctaactgacatt
acattgcaaagtgaatggggagagcaggaggactgggtaatgcaagccgggcggaacctg
aatgttttgttggcgggtcaagagctgcgcattgcagaagaaaatgctaatgttcgtcgg
gcgggctattacccagagattaatttaaatttgagctattcagatcgacaaagcgatgac
cagctacgtgaaagcgaggactaccgcgccagtattgaagtgagcatgcccatctatcgt
ggcggctatacgaccgcaagcgttaggcagggggaaaatcgcatcgacgctaataaagct
gcgtttgataatcagcgtaatcttgcgatgcaggaagtgcgtcaacggttacgctcactc
aaagggcatgtgcgtcgaattgaagccgtcaagcaggctattgcttcaagccaattgttt
ctaaacgccgccgagcgcggagagcagtttggcctacgcgatttagtagatgtgcttgat
gcccgcgctagcctctatgatcaacgcattcaatatgttgacgtcattggtgaatacgca
ctagatagcttagcgctacagtcagcggtaggtgagctagagagtaatgatctagtggca
accatgtcgttactctcttctatacaataa
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