Halomonas sp. R57-5: HALO3425
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Entry
HALO3425 CDS
T04029
Name
(GenBank) Type I secretion outer membrane protein, TolC
KO
K12340
outer membrane protein
Organism
ham
Halomonas sp. R57-5
Pathway
ham01501
beta-Lactam resistance
ham01503
Cationic antimicrobial peptide (CAMP) resistance
ham02020
Two-component system
ham03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HALO3425
09132 Signal transduction
02020 Two-component system
HALO3425
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HALO3425
01503 Cationic antimicrobial peptide (CAMP) resistance
HALO3425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ham02000
]
HALO3425
02044 Secretion system [BR:
ham02044
]
HALO3425
01504 Antimicrobial resistance genes [BR:
ham01504
]
HALO3425
Transporters [BR:
ham02000
]
Other transporters
Pores ion channels [TC:
1
]
HALO3425
Secretion system [BR:
ham02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HALO3425
RTX toxin transporter
HALO3425
Multiple protein transporter
HALO3425
RaxAB-RaxC type I secretion system protein
HALO3425
Antimicrobial resistance genes [BR:
ham01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HALO3425
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HALO3425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
CEP37107
UniProt:
A0A0D6EC89
LinkDB
All DBs
Position
I:complement(3727253..3728716)
Genome browser
AA seq
487 aa
AA seq
DB search
MRLAHWAVNAPLRPLLLAVFTASFVLPAQAADLITITRDALDNNAELASARSEYLGVEAG
RDVARGGLLPQINASGSVTHNEQYESQXSSQAGAGTGAGNVSAGDDRYNTVSLSLEATQA
LYNEVTRREVTQADRQIDQQVYLLAATEQQLLIDVASAYFDILRAYEVLEARLAQERAIG
RQLEQAGEQFEVGLIAITEVEEARATFDQSRADRIAAESNLQVAFEALEQLTGQRYASIE
ALGDSMPIALPEPSSRDYWVEQALELNPQVLAQQAAIEVSRSGVDIARAGRLPTLQAFGN
YQFGDSDIDNTTGNDSSSQVGISANLPIYTGGSTSASIRQGTYQLESSQYDFESQRRSSI
QQVRSLYTQVSNDVETVEAREQAIVSNRSALEATRAGYEVGTRNIVDVLNAEQNLYNAIA
NYAEARYDYVVNLLSLRQQAGRLDVDAIEEVNAWLTGDEVNFTLPESGGNDRYEPALNIG
APPQPGA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcgactggcacactgggcagtcaatgcccctttacgacccctactgttagcggtattt
accgcttcttttgtattgcctgctcaagctgccgatctcatcacgattacccgtgatgcg
ttagacaataacgctgagcttgcctcggcacgttccgaatatttgggcgttgaagcaggt
cgagatgttgcacgaggtgggctgcttccccaaatcaatgcgtcgggcagtgtgacgcat
aacgagcagtatgaaagtcaggkttcatcccaagcgggagcaggtactggcgcagggaat
gtgagtgccggtgatgaccgttacaacacggtatcgctctctcttgaagccacccaggcg
ctttataatgaagtgacccgccgggaagttacccaggccgaccgacagatcgaccagcag
gtctatttgctagcggcgaccgaacagcagctgttaattgatgtggctagcgcctatttc
gacattttgcgtgcttacgaggtcctagaggcgcgtcttgctcaagaacgtgccatcggc
cgccagcttgagcaagcaggcgagcagtttgaggttggtttgattgcgattactgaagtc
gaagaggctcgcgccacctttgatcagtcacgtgctgaccggattgccgctgagagcaat
ctacaggtggcttttgaggcactagagcagttgaccgggcagcgctatgccagcatcgaa
gcgctgggtgacagcatgccgattgcactgcctgagcccagcagccgcgactactgggta
gagcaagcccttgagcttaatccgcaagtattggcccaacaggcggccattgaggtttcc
cgtagcggcgtagacattgcccgcgcgggtcgtttgccgactctgcaagcctttggtaac
tatcaatttggcgacagcgatattgataataccaccgggaatgattcttctagccaggtg
ggtataagcgctaatttaccgatttacaccggtggtagtaccagcgccagcattcgccag
ggaacctatcaactggagagtagccagtacgatttcgagtctcagcgtcgctcgtcgatc
cagcaggtacgctcgctgtatacccaagtcagtaatgacgtggaaaccgtcgaggctcgg
gagcaggccatcgtttctaaccgaagtgcgttggaagctacccgcgccggttacgaagtc
ggcacccggaatattgtggatgttttgaacgctgagcagaatttgtataacgccatcgct
aattacgccgaggctcgctacgactatgtggtgaacctgctctcgctgcgccagcaggcc
gggcgcctggatgtagacgccattgaggaagtcaatgcgtggctaaccggcgatgaggtg
aactttaccttgcccgaaagcggcggcaacgaccgctatgaacccgcgctcaacatcggt
gcgccgccccagcccggcgcttaa
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