Halomonas sp. MS1: NF683_21175
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Entry
NF683_21175 CDS
T09972
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
hams
Halomonas sp. MS1
Pathway
hams01501
beta-Lactam resistance
hams01503
Cationic antimicrobial peptide (CAMP) resistance
hams02020
Two-component system
hams03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hams00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NF683_21175
09132 Signal transduction
02020 Two-component system
NF683_21175
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NF683_21175
01503 Cationic antimicrobial peptide (CAMP) resistance
NF683_21175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hams02000
]
NF683_21175
02044 Secretion system [BR:
hams02044
]
NF683_21175
01504 Antimicrobial resistance genes [BR:
hams01504
]
NF683_21175
Transporters [BR:
hams02000
]
Other transporters
Pores ion channels [TC:
1
]
NF683_21175
Secretion system [BR:
hams02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NF683_21175
RTX toxin transporter
NF683_21175
Multiple protein transporter
NF683_21175
RaxAB-RaxC type I secretion system protein
NF683_21175
Antimicrobial resistance genes [BR:
hams01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NF683_21175
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NF683_21175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Spectrin_Anc-1_2
Ribosomal_L5
Motif
Other DBs
NCBI-ProteinID:
UTD55621
LinkDB
All DBs
Position
complement(4602763..4604217)
Genome browser
AA seq
484 aa
AA seq
DB search
MIRTPHFTLSALALTVTLLSQSALSQSDIPADQQALTELEALANSEAASLALPSLPDLFS
RALRHDADLSRQRHELDATREEVPMARSQLLPQVTASGGYLWQDSTNIQTSPDDFGLDQP
AQRPGEIDETYYQIQLQQPLFSLERWRKMDIANAQVSSAELQLAVVEQELALQVSEAYIK
AYLASQRLGLLESQQDSLELQVRQASRAFDLGVGNRVDLLEAQSRYDQAVSDAVEAENEL
DNALSELERLTGVMPRFQSSAPGELTTVTLNGDIGSPDEWIPRTGQNLKVLLAQQEQQVA
QADTSARRSGYYPELNLNLSYSDRVSDDELRESEDYRAGVELSVPIYRGGYTNASVRQGE
KRIEAGLAAVDNERNLAIQEVRKRIRALNGGERRLQALNQSIESSQLFLDAAERGEQLGL
RDLVDVLDARASLYDQRIKYVDTVGNYALDMISLHIAVGSLESDDLNRIMSLLASLSTSS
QVAR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgatacggacgccacattttactcttagtgcgcttgcacttactgtcacgctgttaagt
cagtctgcattatcgcagagcgatatacctgctgatcagcaggctcttactgaattagaa
gcgcttgctaatagcgaagcagcttccctagcgttgccctcattgcctgatcttttttcc
agggctctacgccatgacgcagacctttcacgtcagcgtcatgagttagatgccactcgc
gaagaagtgccgatggcccgttcgcaacttctgccacaggtcacagcgtccggggggtac
ttatggcaagactctacaaatatccaaacgtctccagatgattttggcctagatcagcct
gcccagcgtccaggtgaaattgatgagacttattatcaaattcaactgcagcagccgctt
ttcagcttggagcgctggcgcaagatggatattgccaacgcccaagtaagttctgctgag
cttcaattggctgtggttgagcaagagctagcattgcaagttagtgaggcctatataaaa
gcttatttagcgtcgcagcgattaggtttgttagagtctcaacaagattcccttgaacta
caggtgcgccaagcaagtcgtgcatttgatctaggtgttggcaatcgggtcgacttattg
gaggctcaatctaggtacgatcaggctgtctctgacgcagttgaagctgaaaatgagtta
gacaatgcgcttagcgaattggaacgcctgacgggtgtaatgccaaggtttcaaagttca
gcgcctggtgagttgaccactgttactctcaatggcgatattggtagtcccgacgaatgg
attccgcgcactggccaaaacctaaaagtcttattagcccagcaagagcagcaagttgcg
caagctgatacaagcgctaggcgttcggggtattacccagagttaaatctaaaccttagc
tattctgaccgagtcagcgacgatgaactaagggagagcgaagattatcgcgcgggcgta
gagctgagcgtgccgatttatcgcggtggttataccaacgctagtgttcggcaaggtgaa
aaacgcattgaagcgggtctggctgctgtcgacaatgagcgtaatcttgccatccaggaa
gtgcgtaagcgtataagagccttaaatggcggagagcgccgtttgcaagcgctcaaccaa
tcaattgaatcaagtcagctatttctggacgctgctgaacgtggcgaacagcttggcctt
cgggatctagtcgatgtgctggatgctcgggccagcttatacgaccagcgtataaaatac
gttgacactgttggtaactacgctttggatatgatctctctgcatatcgcagtgggtagc
ttagaaagcgacgatcttaatcgcattatgtcgctactggcctcgttgtccacttcatcg
caggtagcgcggtag
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