Halarcobacter bivalviorum: ABIV_1838
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Entry
ABIV_1838 CDS
T06437
Name
(GenBank) RND family efflux system, outer membrane channel protein, TolC family
KO
K12340
outer membrane protein
Organism
hbv
Halarcobacter bivalviorum
Pathway
hbv01501
beta-Lactam resistance
hbv01503
Cationic antimicrobial peptide (CAMP) resistance
hbv02020
Two-component system
hbv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hbv00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ABIV_1838
09132 Signal transduction
02020 Two-component system
ABIV_1838
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ABIV_1838
01503 Cationic antimicrobial peptide (CAMP) resistance
ABIV_1838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hbv02000
]
ABIV_1838
02044 Secretion system [BR:
hbv02044
]
ABIV_1838
01504 Antimicrobial resistance genes [BR:
hbv01504
]
ABIV_1838
Transporters [BR:
hbv02000
]
Other transporters
Pores ion channels [TC:
1
]
ABIV_1838
Secretion system [BR:
hbv02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
ABIV_1838
RTX toxin transporter
ABIV_1838
Multiple protein transporter
ABIV_1838
RaxAB-RaxC type I secretion system protein
ABIV_1838
Antimicrobial resistance genes [BR:
hbv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
ABIV_1838
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
ABIV_1838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AXH12827
UniProt:
A0AB33GT93
LinkDB
All DBs
Position
complement(1845429..1846673)
Genome browser
AA seq
414 aa
AA seq
DB search
MNKKIVKLLPLTFLGVNLYALDLNEAIDIALINNNSYIKQQYIYDEAKANVRKSRAGFLP
KVDTSYTYNANKYDLGEGKDNANASAIISYNLFSGLKDYYTLDAAQKNKLASKYTLEASK
HDLVYETKVKYINYLKSLKNIETIENAYKLLQNQYKDAQSKFEQGLLAKNDLLQVNAQML
QAKQNLARAKADSKVSWYNLKNILGGELSKDENIKDLNKDTFFIFDYKEDEIFSRSEIKA
LKNSIEALLSQKNANSYGTSLPSVSLNLAHTKYGEDSSLNSDTLENDEQSTATVNVKWNL
FNGGADYAETIILRKKSLQVKEDLEELKLNIKLQYENAVEEYDVSKLNYETAKISLEQSK
ENYKIVNNRFKEGLSTTTDLINANFLLAQAKQSFDNAFYDRFLAKASLDRILER
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaaatagtaaaacttttaccccttacatttttaggggtaaatttatatgct
ttagatttaaatgaagctattgatatagctttgataaataataatagctatattaaacaa
caatatatttatgatgaagcaaaagcaaatgtaagaaaaagtagagcaggttttttacct
aaagtagatacttcttatacatacaatgcaaataagtatgacttaggtgagggtaaagat
aatgcaaatgcaagtgctataatttcatataatctttttagtggattaaaagattattat
acattagatgctgcacaaaaaaataaacttgcttcaaaatatactttagaggcttcaaaa
catgatttagtatatgaaacaaaagtgaagtatataaattatttaaagagtttaaaaaat
attgagaccatagaaaatgcatataaacttttacaaaatcaatataaagatgcacaaagt
aagtttgaacaaggtttattagcaaaaaatgatttacttcaagtaaacgcacaaatgcta
caagcaaaacaaaatttagcaagagcaaaagcagattcaaaagtttcttggtataactta
aaaaatattttaggtggcgagttatctaaagatgagaatattaaagatttaaataaagat
actttttttatttttgattataaagaggatgaaattttttcaagaagtgagattaaagca
ttgaaaaatagtattgaagctttattgagtcaaaaaaatgcaaactcttatggaacttca
ctaccatctgtatctttaaatttagcacatacaaaatatggagaagattcttctttaaat
tctgatactttagaaaatgatgagcagtcaactgcaactgtaaatgtaaaatggaatctt
tttaatggtggagctgattatgctgaaactatcattttaagaaaaaagagtttacaagtt
aaagaggatttagaggagttaaaattaaatataaaacttcaatatgaaaatgcagttgag
gagtatgatgtttctaagttaaactatgagactgcaaaaatctctttagagcaatcaaaa
gagaattataaaattgtaaataataggtttaaagagggtttatctacaactacagattta
atcaatgcaaactttttattagcacaagcaaaacagagttttgataatgctttttatgat
agatttttagctaaggcttctttagacagaattttagaaagataa
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