Hemicordylus capensis (graceful crag lizard): 128348708
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Entry
128348708 CDS
T08891
Name
(RefSeq) interstitial collagenase-like
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128348708
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hcg01002
]
128348708
Enzymes [BR:
hcg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
128348708
Peptidases and inhibitors [BR:
hcg01002
]
Metallo peptidases
Family M10
128348708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_4
Reprolysin_3
DUF4953
Peptidase_M66
Peptidase_M54
Metallopep
Motif
Other DBs
NCBI-GeneID:
128348708
NCBI-ProteinID:
XP_053160235
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All DBs
Position
3:complement(26331346..26346342)
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AA seq
470 aa
AA seq
DB search
MHPPILLFLLLSFTFHTYAAPVGQGNKDGDMDIVKKYLDDFYSSDPVIIGQFKTKGSDPM
TEKLKAMQRFFKLKVTGEADTETLEVMMKARCGVPDLGQFVLTDGNPKWKHTNITYSIVN
YTPDMHHAEVDKAIQKAFEVWSNVSPLTFKKLETGTADIIISFERRVHGDNSPFDGPDGI
LAHAFQPGPYIGGDAHFDEDELWTSQGGRGRNLFLVAAHELGHSLGLSHSTDSGALMYPT
YSYTEPSAFKLPQDDINGIQAIYGKPDVAVQPTGPTTPEACDPRTTFDAVTSLRGEIMFF
KGRHFWRKHPQLPDVELYFISLFWPSLPATGIDAAYENFEEDLVFLFKGNKYWVLNGYEI
LSGYPRSIDRLGFPRTVKKIDAAFSDPESGKTYFFVGSKYWRYDEITHSMERGYPKSIAR
NFEGVGPQIDAALYHDGSIYFFQGTKLIQFDHDSKSVAQKTQKSNSLLNC
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcatccaccaattctactgttcctgctacttagcttcacatttcacacttatgccgct
ccagtgggtcaaggcaacaaagatggagacatggatattgttaagaaatacttggatgac
ttctacagctctgatccagttattattggtcagttcaaaacaaaaggttctgacccgatg
actgaaaaactcaaagcaatgcagagattttttaagctgaaagtgactggggaggctgac
acagaaaccttggaggtgatgatgaaggccaggtgtggtgtacctgatttggggcagttt
gtcctcactgatgggaatcctaaatggaagcacaccaatattacatacagcatagtaaat
tacacaccagatatgcatcatgcagaagtggacaaagcaatccagaaagcatttgaagtg
tggagcaatgtgtcacccctgacattcaaaaagctggagactggcactgcggatatcatt
atctcttttgaaagaagagtccatggtgacaattctccttttgatggacctgatgggata
ctggcacatgcctttcagccagggccatatattggtggagatgctcattttgatgaagat
gaattatggactagtcaaggaggaagaggtcgcaacttgtttcttgtagctgcccatgaa
ttaggccattctcttggtctctctcactctactgactctggggcgctgatgtaccccact
tactcttacaccgaacccagtgcatttaaacttcctcaggatgatatcaatggcattcaa
gctatctatggaaagccagatgtggcagtccaaccaactggacccacaacaccagaggct
tgtgaccccaggactacttttgatgctgtcaccagccttcgtggggaaattatgttcttt
aagggcaggcatttctggcggaaacatcctcagctgccagacgtggagctctatttcatc
tccctcttctggccaagcctgccagcaactggaatagatgccgcttatgaaaattttgaa
gaggatctagtttttctttttaaaggaaacaaatactgggttctaaatggatatgaaatc
ctgtctgggtatcctaggagcatcgaccgtctgggcttccccagaaccgtgaagaaaatt
gatgctgcatttagtgatccagaatctgggaagacatatttctttgtaggtagcaagtac
tggagatatgatgaaatcacgcattccatggaaaggggctaccccaaaagtatagccaga
aactttgaaggtgttggtcctcaaattgatgctgctctataccatgatggttccatctat
ttcttccaaggaacaaagctgatccagtttgatcatgacagtaaaagcgttgctcagaag
actcaaaagagcaacagcctgctgaactgttaa
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