Helicobacter cholecystus: NCTC13205_00154
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Entry
NCTC13205_00154 CDS
T06600
Name
(GenBank) outer membrane channel protein
KO
K12340
outer membrane protein
Organism
hcl
Helicobacter cholecystus
Pathway
hcl01501
beta-Lactam resistance
hcl01503
Cationic antimicrobial peptide (CAMP) resistance
hcl02020
Two-component system
hcl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCTC13205_00154
09132 Signal transduction
02020 Two-component system
NCTC13205_00154
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC13205_00154
01503 Cationic antimicrobial peptide (CAMP) resistance
NCTC13205_00154
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcl02000
]
NCTC13205_00154
02044 Secretion system [BR:
hcl02044
]
NCTC13205_00154
01504 Antimicrobial resistance genes [BR:
hcl01504
]
NCTC13205_00154
Transporters [BR:
hcl02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC13205_00154
Secretion system [BR:
hcl02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NCTC13205_00154
RTX toxin transporter
NCTC13205_00154
Multiple protein transporter
NCTC13205_00154
RaxAB-RaxC type I secretion system protein
NCTC13205_00154
Antimicrobial resistance genes [BR:
hcl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NCTC13205_00154
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NCTC13205_00154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
VEJ24027
LinkDB
All DBs
Position
1:173618..174838
Genome browser
AA seq
406 aa
AA seq
DB search
MRRVGVLLYFVSFVFGLDINESVQKALQKSHKIKEQHHILSSLKAQLGIYEGAYYPKIDL
SNESSYNTRNNLNNKTSLVLSTNLFNGMKDYNTLKMQEQNIQAQDSEIAKVQGEVRYGIK
KLYTQILLAKGLLETSQESAKLLELQLSQAKQFYKQGISAKNNVLSVEVSLASAQLDINS
YITRLRYLLTSLELLLEERVELKELKDLASCEIELDYDQLSLILFEHHQEYKKLKKQEQA
LFFEIESAKGAYYPRIDLSVGGNVVAGYQNYSQANVQLALTFNLFNGLKDSSFIQYKRYE
LLSLQSKIQAYQKQVLSDLKKAVGDFNLAKDQYLLSKKTIQSAQENYRIVSNRYKQNLEN
STTLLDAELMLKTARANLLQAQYGIWDNLFYVEYLIGREVGDFLIQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
gtgagaagggtaggagtgttgctttattttgtaagttttgtatttggattagatattaat
gagagtgtgcaaaaagcattgcaaaaaagtcataaaattaaagagcagcaccatatactc
tcttctctcaaagcccaattaggaatctatgaaggggcatattatccaaagattgattta
agcaatgaaagtagttacaacacacgcaataatctcaataataaaacctctcttgtgctg
agcactaatctttttaatggaatgaaagactataatacccttaaaatgcaagaacaaaat
atccaagctcaagatagcgagattgccaaagtgcaaggggaggtgagatatgggattaaa
aagctttacactcaaattcttcttgctaaaggattgctagaaacctcacaagaatcagca
aaacttcttgaactccagctttctcaagccaaacaattttataagcaagggatttcagca
aaaaataatgttttaagtgtagaggtctctcttgcaagtgctcagcttgatattaattct
tatataactcgcttgcgctatttgcttacttcacttgaacttttgcttgaggagagggta
gagcttaaagagcttaaagatttagcttcttgtgagattgagcttgattatgaccaattg
agtttgattctttttgagcatcatcaagaatataaaaaactcaaaaagcaagaacaggcc
ttattctttgagattgaaagtgctaagggagcgtattatccaaggattgatttaagtgta
ggaggcaatgtggttgcaggataccaaaactattctcaagccaatgtccaattagcgctc
acttttaatctctttaatggtcttaaagatagctcatttatacaatacaagcgttatgag
cttttaagtttgcaatctaaaatccaagcctaccaaaagcaagttctctctgatttgaaa
aaggcagttggagattttaatcttgccaaagatcaatatctcctttctaaaaaaacaatc
caatctgctcaagagaattatcgtattgtgtctaatcgttataaacaaaatctagaaaat
tccaccactttacttgatgcagagctaatgctaaaaactgcaagggccaatcttctccaa
gcccaatatgggatttgggataatcttttttatgtagaatatttaataggcagagaagtg
ggggactttcttatccaataa
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