Helicobacter cinaedi PAGU611: HCN_1832
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Entry
HCN_1832 CDS
T02034
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
hcp
Helicobacter cinaedi PAGU611
Pathway
hcp01501
beta-Lactam resistance
hcp01503
Cationic antimicrobial peptide (CAMP) resistance
hcp02020
Two-component system
hcp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hcp00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HCN_1832
09132 Signal transduction
02020 Two-component system
HCN_1832
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HCN_1832
01503 Cationic antimicrobial peptide (CAMP) resistance
HCN_1832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcp02000
]
HCN_1832
02044 Secretion system [BR:
hcp02044
]
HCN_1832
01504 Antimicrobial resistance genes [BR:
hcp01504
]
HCN_1832
Transporters [BR:
hcp02000
]
Other transporters
Pores ion channels [TC:
1
]
HCN_1832
Secretion system [BR:
hcp02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HCN_1832
RTX toxin transporter
HCN_1832
Multiple protein transporter
HCN_1832
RaxAB-RaxC type I secretion system protein
HCN_1832
Antimicrobial resistance genes [BR:
hcp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HCN_1832
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HCN_1832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BAM12997
LinkDB
All DBs
Position
complement(1817621..1818997)
Genome browser
AA seq
458 aa
AA seq
DB search
MKQWIFLLVCIVASSGKAEYLELQSAYKQVLESNDGLKSTQHAVQKQEKLNLASKMLYLP
QVSLGAYYVRLQDPMNMHLVNQSQLGNLSGNIGGNSALAPLLQHLGQPVTLQDQNVIFGA
VNIIYPIFTGGKRYFANKLSQIALEDSYLALKLKELSLFEDCVKLYYGVVLNNQILNTLE
SANSGHLTHYQNAQKLQSKGQVARLETLQAQVNYDKSSIDVKKASDNLIIANMALNAMLN
RESKERLELVKQIDIKQDTRLESVEYFINKTLEVYPALSLMDNKIKSAKELSHIEFSTFL
PEVGLFGSYMMNDNSSVLDKAMPNWFAGVGAKWSLITPGGRIQKYQASKIASIEAELAKS
QATKDLKTLCEKTYNEVLSFKSQYFSLQSSIELANENLKLRQKAFLQGMSTSADVSDAQN
ALALAIIERQSVAYNYAIALARLLSLSDEVDRFYGFFN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatggatattcttgcttgtttgtatcgtagcgagtagtggaaaagcggaatat
ttggaattgcaatcagcttacaagcaggttttagaaagcaatgatgggttaaaatccacg
caacacgccgtgcagaagcaagaaaaactcaacctcgcaagtaaaatgctctatctccca
caagtctcgcttggggcttattatgtgcgtttgcaagatccgatgaatatgcacctagtc
aatcaatcccagcttggcaatcttagtgggaatatcggtgggaattctgctctagctccg
ctattacagcatttaggacagcctgtaaccttgcaagatcaaaatgtcatctttggggct
gttaatatcatatatcccatttttacgggcggtaagcggtattttgctaataaactctct
caaatcgcccttgaagattcctatcttgcccttaaactcaaagagctaagtttgtttgaa
gattgcgtgaaattgtattatggtgtggtgttaaacaatcagattctaaacactctagaa
tctgctaatagcgggcatttgacacattatcaaaacgcacaaaagctacaaagtaaaggg
caagtcgcacgactagaaacactccaagctcaagtgaattatgataaatcaagcattgat
gtcaaaaaagcaagtgataatctcattatcgcaaatatggcactcaatgctatgcttaat
cgtgaatctaaagagagattggagcttgtaaaacagattgatattaagcaagatacgagg
ctggagagtgttgagtattttattaacaaaacgcttgaagtttatcctgccctaagcctt
atggataataagattaaatccgccaaagagctctctcacattgagttttctacatttttg
cctgaagttgggctatttggtagctatatgatgaatgataatagttcggtgcttgataag
gctatgccaaattggtttgcaggggttggcgcaaagtggtcgcttatcacgcccggaggg
agaatccaaaagtatcaagcaagtaagatcgcttccattgaggctgaacttgctaaatct
caagccacaaaagatttaaaaactttatgtgagaaaacctataatgaagtgctgtctttc
aaatcgcaatatttcagtttgcagtcatctattgaacttgcaaatgagaatctaaaattg
cgtcaaaaggcgtttttgcaaggaatgagcacaagtgctgatgtgagcgatgctcaaaat
gctttagctctagccattattgagcgtcaaagtgtggcgtataactatgctatcgccctt
gctagactcttaagtctaagtgatgaggtggatagattctatggattttttaactaa
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