Hymenobacter canadensis: O3303_00580
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Entry
O3303_00580 CDS
T09156
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
hcw
Hymenobacter canadensis
Pathway
hcw01501
beta-Lactam resistance
hcw01503
Cationic antimicrobial peptide (CAMP) resistance
hcw02020
Two-component system
hcw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
O3303_00580
09132 Signal transduction
02020 Two-component system
O3303_00580
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
O3303_00580
01503 Cationic antimicrobial peptide (CAMP) resistance
O3303_00580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcw02000
]
O3303_00580
02044 Secretion system [BR:
hcw02044
]
O3303_00580
01504 Antimicrobial resistance genes [BR:
hcw01504
]
O3303_00580
Transporters [BR:
hcw02000
]
Other transporters
Pores ion channels [TC:
1
]
O3303_00580
Secretion system [BR:
hcw02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
O3303_00580
RTX toxin transporter
O3303_00580
Multiple protein transporter
O3303_00580
RaxAB-RaxC type I secretion system protein
O3303_00580
Antimicrobial resistance genes [BR:
hcw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
O3303_00580
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
O3303_00580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Pullulanase_N2
Motif
Other DBs
NCBI-ProteinID:
WBA42067
LinkDB
All DBs
Position
complement(125262..126686)
Genome browser
AA seq
474 aa
AA seq
DB search
MPRSFFFTLLLALPLPMLAQQPVLPTREPASKPQSKSQTEKPETVADAPPLTLAEAIRLG
LESNYDIRVSRQDERIAENNVTRGNAGQLPVVNGNLTRNFNRNNVRQESSARPEASIANG
AQSNLLNANVAATWTLFDGLGMFIAYDRLKSLEQSQRQLTRATVEETVATITDAYYVVVR
ESGKIRASEEALKIGQARIDLTQARVDVGVSAKVEVLTARVDYNADRSLLIQQQEALQTA
KINLNNLLGRTPRLNFRPADSIVVATDLSRESVAQAVQQNNPRLQQARLNTEIATYDRKL
VRASRFPQIGLTTGYGYNRNINGAAFFGNQLVTNTGRTYGLNYGVVATIPIFDGFNRNRL
EQNARIGEVQSSLLLGQTQLQLETEAEQAYAQYQNRLQLLELEEANILLARENVAIALER
YRLGLLVPLALREAQRTQLDAEVRLLDIRYQAKQAEIILRRLSSGLVQESGQPR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgccccgctccttctttttcactctcctactggctttgcctctgccgatgctggcgcaa
cagccggtgctgcccacccgggaaccagcctcgaagccccagagcaaatcccagacggag
aagccggaaaccgtagccgacgccccgcccctcacgctggccgaggccatccggctgggc
ctggaaagcaattacgacattcgggtttcgcggcaggatgagcgcatcgccgaaaacaac
gtgacccgcggcaacgccggccagctgcccgtggtgaacggcaacctgacccgcaacttc
aaccgcaacaacgtgcggcaggagtcgtcggcgcggcccgaggccagcattgccaacggc
gcacagtccaacctgctcaacgccaacgtagccgccacctggacccttttcgacgggctg
ggcatgttcatcgcctacgaccggctgaagtcgctggagcaaagccagcgccagctcacc
cgcgccaccgtcgaggaaaccgtggccaccatcaccgacgcctattatgtggtggtgcgc
gagtccggcaagatcagggccagcgaggaggccctgaaaatcggacaggcgcgcatcgac
ctcacgcaggcccgcgtggatgtgggcgtgagcgccaaagtggaagtgctgacggcccgc
gtggactacaacgccgaccgctcgctgctgattcagcagcaggaagcgctgcagacggcc
aaaatcaacctcaacaacctgctgggccgcactccgcgcctcaacttccgccccgccgac
tccattgtagtggctaccgacctgagccgggaaagcgtggcgcaggccgtgcagcagaac
aaccctcgcctgcaacaggcccgcctcaacaccgaaattgccacctacgaccggaagctg
gtgcgcgcctcccgcttcccgcagatcggcctgacgaccggctacggctacaaccgcaac
atcaacggggccgcgttcttcggcaatcagctcgtgaccaacacgggccgcacgtatggc
ctcaactacggcgtggtggccaccattcccatcttcgatggtttcaaccgcaaccggctg
gagcagaacgcccgcatcggcgaagtgcaaagcagcctgctgctgggccagacgcagctg
cagctggaaaccgaagccgagcaggcctatgcccagtaccagaaccgcctgcagttgctg
gagctggaagaagccaacattctgctggcccgcgaaaacgtggccattgccctagagcgc
taccgcctgggcctcttagtgcccctggctctgcgcgaagcccaacgcacccagctcgac
gccgaagtacgcctgctcgacatccgctaccaagccaagcaggccgagattatcctgcgc
cgcctgagcagcggcctagtgcaggaaagcgggcaaccgcgctag
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