Hymenobacter canadensis: O3303_19610
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Entry
O3303_19610 CDS
T09156
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
hcw
Hymenobacter canadensis
Pathway
hcw01501
beta-Lactam resistance
hcw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
O3303_19610
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
O3303_19610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcw02000
]
O3303_19610
01504 Antimicrobial resistance genes [BR:
hcw01504
]
O3303_19610
Transporters [BR:
hcw02000
]
Other transporters
Pores ion channels [TC:
1
]
O3303_19610
Antimicrobial resistance genes [BR:
hcw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
O3303_19610
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
O3303_19610
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
O3303_19610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Nsp1_C
Motif
Other DBs
NCBI-ProteinID:
WBA44099
UniProt:
A0ABY7LW23
LinkDB
All DBs
Position
unnamed1:complement(57745..59286)
Genome browser
AA seq
513 aa
AA seq
DB search
MQVPVFSPVTFRVGVAALSLLATGCRVPALVQQPRAKALPATYVAAQTTDSATATTTTPV
ATNLAPRDSATVADLPIGQFFPDPVLVALLDTALRQNPDLAQAAARVQQARAELVARRGA
LLPTVDAVGSAGLDRYGRYTQNGVGNFDTNFSDNISRNQNIPNPTPDFFAGLRASWEVDL
WGKLRGLRRAAYLRMLASERGRQLVQTDLVAEVARTYYEILATDQELEILTRNAQLQART
VELSRIQKEGARATELAVQQLLAQQRRTEALTSEARQRLVEAENRLNRLLGRYPQPISRG
TALLQQAIPEQVQAGLPAGMLRRRPDIRQAEAELLATGAEVSSARAAFFPSLVLTPYAGV
NAFRAELLLRAPESLALGILGNLSAPVLNRAAIRAAYGQAAARQAEAWYAFQETSLRGVE
EVTTHLRGLENYRRAYGSRQQEVTALNQAVSISDDLFLAGYANYLEVITAQRNVLDAELE
LVGTRQQEMEQLIELYRALGGGWTAAPLPTERR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtacctgttttctcccccgtgacattccgagtaggcgtggcagccctgagtctg
ctggccactggctgccgggtgcccgccctggtgcagcagccccgcgccaaagccctgccg
gccacctacgtagccgcgcaaaccaccgattccgccacggccaccacgaccacgccggtg
gccaccaacctggccccgcgggattcggctaccgtggccgacttgcccatcgggcagttc
ttccccgacccggtgctggtggccctgctggacacggccctgcgccagaaccccgatttg
gcgcaggccgctgcccgcgtgcagcaggcccgcgctgagctggtggcccggcggggggcc
ttgctgcctaccgtggatgcggtgggctcagccggcctggaccgctacggccgctacact
cagaatggcgtcggtaacttcgacaccaacttctcggacaatatcagccgcaaccagaac
atccccaaccccacacccgacttctttgccgggctgcgggccagctgggaagtggacctg
tggggcaagctgcgcggcctgcgccgggcggcctacctgcggatgctggcctcggaacgg
ggccggcagctcgtgcaaaccgacctggtggccgaagtggcccgcacctactacgagata
ctggccaccgaccaggaactggaaatcctgacccgcaacgcgcagctgcaggcccgcacc
gtggagctgagccggattcagaaagaaggggcccgcgccaccgagctggccgtacagcag
ctgctggcccagcagcgccggacggaagccctgacctcggaagcgcggcagcggctggta
gaagccgaaaaccgcctgaaccgcctgctgggtcgctatccgcagcctatctcacggggc
acagcgttgctgcaacaagccatccctgagcaggtgcaggcgggcttgcccgccgggatg
ctccgccgccgccccgatatccggcaggccgaggccgagctgctggccaccggcgccgag
gtatcgtcggcccgggccgcctttttcccctcgctggttttgacgccctacgccggggta
aatgccttccgggccgagctgctgctgcgcgcgccggagtcgctggcgctgggcatcctg
ggtaacctgtcggcgccggtgctgaaccgggccgccatccgagcggcgtacgggcaggca
gcggcccgccaggcggaagcgtggtacgcatttcaggaaaccagcctgcgcggcgtcgag
gaagtcacgacccacctgcgggggctggaaaactaccgccgggcctatggctcgcgccag
caggaggtaacggccctgaaccaggccgtaagcatctccgacgacctgttcctggccggc
tacgccaactacctcgaagtcatcacggcccagcgcaacgtgctcgatgccgagctagag
ctggttggcacccgccagcaggaaatggagcagctcatcgagctctaccgggccctgggc
ggcggctggacggcggccccgctgcccaccgaacggcgctaa
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