Hyphomicrobium denitrificans ATCC 51888: Hden_1247
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Entry
Hden_1247 CDS
T01265
Name
(GenBank) type I secretion outer membrane protein, TolC family
KO
K12340
outer membrane protein
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn01501
beta-Lactam resistance
hdn01503
Cationic antimicrobial peptide (CAMP) resistance
hdn02020
Two-component system
hdn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Hden_1247
09132 Signal transduction
02020 Two-component system
Hden_1247
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Hden_1247
01503 Cationic antimicrobial peptide (CAMP) resistance
Hden_1247
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hdn02000
]
Hden_1247
02044 Secretion system [BR:
hdn02044
]
Hden_1247
01504 Antimicrobial resistance genes [BR:
hdn01504
]
Hden_1247
Transporters [BR:
hdn02000
]
Other transporters
Pores ion channels [TC:
1
]
Hden_1247
Secretion system [BR:
hdn02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Hden_1247
RTX toxin transporter
Hden_1247
Multiple protein transporter
Hden_1247
RaxAB-RaxC type I secretion system protein
Hden_1247
Antimicrobial resistance genes [BR:
hdn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Hden_1247
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Hden_1247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ADJ23059
UniProt:
D8JWE6
LinkDB
All DBs
Position
1268922..1270358
Genome browser
AA seq
478 aa
AA seq
DB search
MRARLRSRCAISALLALAGVFAIPTSGSAETLVDALSAAYQYSPTLDAERARQRARDEDI
ARANSGYRPDINLSASVGRQGTWSKTPLGNSSSVSSPRGYGVDLVQPVFTGFQVTNAVNA
AEATDRAGRETLRNTEQQVLLDAVTAYGDVVRDQAIVKLNENNLKFLDAELKATQDRFNV
GEVTKTDVAQAQARRAAGQSDLDQARANLKSSRAIFEQVVGHPPSNLIEPNPNTKLVPRS
VTDAIAIGTKENPQVVQALYSEQAGRFSVDQIRGELLPQAQLEANWTDSFDSSELIDRGS
TASVVGRVNVPIYPAGGEVYARLRQAKHTHISLLQQIEEARSLTQSQVVQAWAQLQGFKA
QSESDRASITANTTALEGVKEEERVGQRTLLDVLNAQQELLQSQVNLETTKRNILVASYT
LVSAVGRLSVSEVGAATEVYHPEVHYEEVRRKWWGIDITHDDGRREHIDVGEDGKPLK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgcggcttaggtcacgctgcgcgatctcggctctgctggctctggccggggtt
tttgcgattccaacatcgggatcggccgagacactcgtcgatgctctctcagccgcatat
caatatagcccgacgctcgatgcggaacgcgcccggcagagagcgcgcgacgaagacatc
gcgcgtgcgaattccggttatcgtcccgatatcaatctttccgccagcgtcggccgccag
ggaacgtggagcaagactccgctgggcaatagcagcagcgtgtcatcgccgcgcggttat
ggcgttgatctggttcagcccgtctttacgggctttcaagtcaccaacgccgtgaatgcg
gcggaggcgacggaccgggccgggcgtgaaacgctgcgcaatacggaacagcaggttctg
ctggatgccgtcacggcctacggcgacgtcgtgcgcgatcaggcgatcgtcaagctcaac
gagaacaacttgaagttcctcgacgccgaactgaaggcgacgcaggatcgcttcaacgtc
ggtgaagtgacgaagaccgacgtcgcgcaggctcaggcccggcgtgcagcggggcagtcg
gatctcgatcaggcgcgcgccaacctcaagtccagccgcgccatcttcgagcaggtcgtc
ggacatcctccgtcaaacctgattgaacccaatccgaatacgaagctcgttcctcgcagc
gtcacggacgccatcgcgatcgggacgaaagagaatccgcaggtcgtccaggcgctctac
tcggagcaggctggccggttcagcgtcgatcagattcgtggcgaacttcttccgcaggcg
cagcttgaagccaactggacggacagcttcgacagctcggaacttatcgaccgggggagc
acggcttccgtcgtcggccgcgtcaacgttccgatctatccggcgggtggcgaagtctac
gcgcggctgcggcaggcgaagcatacgcacatttcgcttttgcagcagatcgaggaagcg
cgctcgctgacgcagtcgcaggtcgtccaagcgtgggcgcagctacaaggctttaaagcc
cagtcagaatccgatcgtgcgtccatcacggcgaacacgacggctctcgaaggcgtcaag
gaagaagagcgcgtcgggcagcggacattgctcgacgttttgaacgcgcagcaggaactg
ttgcagtcgcaggtcaatctcgagacgacgaagcgcaacattctcgtggcgtcgtatacg
ctggtgtccgccgtcgggcgtctcagcgtgtccgaggtcggcgctgctaccgaagtttat
caccccgaagtgcattacgaagaagtgcgccgaaagtggtggggcatcgacatcacgcat
gacgatggccgccgtgagcacatcgacgtcggcgaggacggcaagccgctgaagtag
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