Hyphomicrobium denitrificans 1NES1: HYPDE_29253
Help
Entry
HYPDE_29253 CDS
T02646
Name
(GenBank) TolC family type I secretion outer membrane protein
KO
K12340
outer membrane protein
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt01501
beta-Lactam resistance
hdt01503
Cationic antimicrobial peptide (CAMP) resistance
hdt02020
Two-component system
hdt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HYPDE_29253
09132 Signal transduction
02020 Two-component system
HYPDE_29253
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HYPDE_29253
01503 Cationic antimicrobial peptide (CAMP) resistance
HYPDE_29253
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hdt02000
]
HYPDE_29253
02044 Secretion system [BR:
hdt02044
]
HYPDE_29253
01504 Antimicrobial resistance genes [BR:
hdt01504
]
HYPDE_29253
Transporters [BR:
hdt02000
]
Other transporters
Pores ion channels [TC:
1
]
HYPDE_29253
Secretion system [BR:
hdt02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HYPDE_29253
RTX toxin transporter
HYPDE_29253
Multiple protein transporter
HYPDE_29253
RaxAB-RaxC type I secretion system protein
HYPDE_29253
Antimicrobial resistance genes [BR:
hdt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HYPDE_29253
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HYPDE_29253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PhnG
Motif
Other DBs
NCBI-ProteinID:
AGK57526
UniProt:
N0BAJ3
LinkDB
All DBs
Position
1315118..1316593
Genome browser
AA seq
491 aa
AA seq
DB search
MQLTKIAESQPSRVRARLRSRCAVSALLALAGIFAVPSSGFAETLVDALSAAYQYSPTLD
AERARQRARDEDIARANSGYRPDINLSASVGREGNWTKSPAGNSSSVTSPRGYAVDLVQP
VFTGFQVTNAVNAAEATDRAGRETLRQTEQQILLDAVTAFGDVVRDQAIVKLNENNLKFL
DAELQATQDRFNVGEVTKTDVAQAQARRAVGQSDLDQARANLKSSRAIFEQVVGHPPANL
VEPNPNTKLVPRSVTDAIAIGTKENPQVVQALYSEQAGRFNVDQIRGELLPQAQLEANWT
DSFDPSELIDRGSTASVVGRVNVPIYPAGGEVYARLRQAKHTHISLLQQIEEARSLTQSQ
VVQGWAQLQGFKAQAESDRASITANTTALEGVKEEERVGQRTLLDVLNAQQELLQSQVNL
ETTKRNILVASYTLVSAIGRLSVSEVGAATEVYHPEVHYEDVRNKWWGIDITHDDGRREH
IDVRDKGAPIK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgacgaagatagcggaatctcaaccgtcaagggtgcgtgcgcggcttaggtcg
cggtgcgcggtttccgccttgcttgcgctggcgggcattttcgcggttccttcgtccggt
tttgcggagacgctggtcgatgcgctgtccgccgcttatcaatacagcccgacgctggat
gcggaacgcgcccggcaaagggcgcgcgatgaagacattgcgcgggccaattccggctac
cgtcccgatatcaacctttcagcgagcgtcggccgcgaggggaattggaccaagtctcct
gccggaaatagcagtagcgtgacgtctccgcgcgggtatgccgtcgaccttgtgcagcct
gtctttacgggctttcaggtcaccaatgccgtgaatgcggccgaagcgaccgaccgggcg
ggacgggagacgctgcgacagacggaacagcagatcttgctcgatgccgtgacggccttc
ggcgacgttgtgcgcgatcaggcaatcgtcaagctcaatgagaataacctgaagtttctc
gatgccgagctacaggcaacccaagaccggttcaacgttggcgaagtcacgaagaccgac
gttgcgcaggctcaggcgcggcgtgctgtcggacaatcggatctcgaccaggcccgcgcc
aatctgaaatccagccgcgcaattttcgagcaggtcgttggacatcctccggcgaacctg
gtcgaaccgaatccgaatacgaagctcgtgccgcgcagcgttaccgacgcgattgcgatc
gggacgaaagagaatccgcaggtggttcaggcgctctattccgagcaggccgggcgtttc
aacgtcgatcagattcgcggcgaattgcttccgcaagcgcagctcgaagcaaactggacg
gatagtttcgatccgtcagagctcatcgaccggggaagcaccgcatccgtcgtcggtcgg
gtcaacgttccaatctatccggcgggcggcgaagtctatgcgcgcttgcgtcaagcgaag
catacgcacatctcgcttttgcagcagatcgaggaagcgcgctcgctgacgcaatcgcag
gtcgttcaggggtgggcgcagcttcaagggtttaaagcgcaggccgaatccgatcgggca
tccatcacggcaaacacgacggcgcttgaaggcgtcaaggaagaagagcgcgtcggtcag
cgcacattgctcgacgtcttgaacgcgcagcaggagcttctccagtctcaagtcaatctt
gagacgacaaagcgcaatattcttgttgcgtcctatacgcttgtgtcggcgatcggtcgt
ctcagcgtttccgaagtcggcgcggctacggaggtttaccaccccgaggtgcattatgag
gatgtgcgcaacaagtggtggggcatcgacattacgcatgacgatggtcgccgtgagcac
atcgacgttcgggacaaaggcgctccgatcaaatag
DBGET
integrated database retrieval system
