Herbaspirillum sp. DW155: HBDW_20420
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Entry
HBDW_20420 CDS
T10195
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
hew Herbaspirillum sp. DW155
Pathway
hew01501
beta-Lactam resistance
hew02024
Quorum sensing
Module
hew_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HBDW_20420
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HBDW_20420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hew02000
]
HBDW_20420
01504 Antimicrobial resistance genes [BR:
hew01504
]
HBDW_20420
Transporters [BR:
hew02000
]
Other transporters
Pores ion channels [TC:
1
]
HBDW_20420
Antimicrobial resistance genes [BR:
hew01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HBDW_20420
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
HBDW_20420
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
HBDW_20420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PL48
Motif
Other DBs
NCBI-ProteinID:
BEV15254
LinkDB
All DBs
Position
complement(2232118..2233587)
Genome browser
AA seq
489 aa
AA seq
DB search
MTRIAFSKLSALTVIAFSLTMAGCADQGGIRPQAQVRDVAVLDAGQAIRQAAGEAGWPQR
AWWEAYGDAQLNQLVTRAVAGNPSMAVAAARVRQARSMAQSTHAGELPSAQLDVSMGRKD
WSDNVYYGAAFRDKLTWNNTATLGLSYNVDLWDRNRNATLRAEDEMHALAADARAAQLDL
EGNVVRTYVQLALQYGLLDNTEALLKEEQKILDLAHRRFKGGLGTQLEITQAESPLPETR
RQIEALHENIALIRNQLAALLGAGPGAADGITRPTMQLQTAIGLPSALPADLVGRRPDIS
AARWRVEAAAKGISVAKAAFYPNINLLAGIGPAAAGGGLFSFLSGPNLQTTYGPAISLPV
FEGGRLRGQLGAASAGYDIEVEHYNALLSQALKGISDQVVTLQSVVRQQVQAQESVQAAQ
KNVDIATRAYQRGLTDYLNVLQAQTQWLRQQQIVQQLQAQRLASYAALQTALGGGMQDGS
SAPAEVAAQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacacgtatcgccttctcgaagttatcagccctgaccgtcattgcgttttcgctgaca
atggccggctgcgctgaccagggcggcatccggccgcaggcccaggtacgcgacgtggcc
gtgctcgacgccggccaggccatccgccaggccgccggcgaagccggctggccgcagcgg
gcctggtgggaggcgtatggcgatgcgcaactgaatcagctggtgacccgcgccgtggcc
ggcaaccccagcatggccgtggctgcagcccgggtgcgtcaggcccggtcgatggcgcag
tccacgcatgccggtgaattgcccagcgcccagctggacgtgtcgatgggccgcaaggat
tggtccgacaacgtgtattacggcgctgccttccgcgacaagctgacctggaacaacacg
gcgaccctgggcctgtcctataacgtcgacctgtgggaccgcaacaggaacgccacgctg
cgcgccgaggatgaaatgcacgcgctggccgccgatgcgcgcgccgcccagctggatctg
gaaggcaacgtggtccgcacctacgtacaactggcactgcaatacggcctgctggacaac
accgaagccctgctcaaggaagaacagaaaatcctcgacctggcccatcgccgcttcaag
ggcggcctcggcacccagctggaaatcacccaggccgagtcgccgctgccggaaacccgc
cgccagatcgaagccctgcatgaaaacattgccctgatccgcaaccagctggccgcgctg
ctgggcgcaggcccgggcgccgccgatggcatcacccggccgaccatgcagctgcaaacc
gccatcggcctgcccagcgcgctaccggccgacctggtgggccgccgacctgacatcagc
gccgcgcgctggcgcgtggaagcggcggccaagggcatttcggtggccaaggcagccttc
tatcccaacatcaacctactggctggcatcggcccggcggcggccggtggcgggctgttc
tccttcctctccgggcccaacctgcagaccacctatggcccggcgatctcgctgccggtc
ttcgagggcggacgcctgcgcgggcaactgggcgcggccagtgccggttatgacatcgag
gtcgagcactacaatgccctgttgtcgcaagccttgaagggcatctcggaccaggtggtg
accctgcaatcggtagtgcgccagcaagtgcaggcacaggaatcggtacaggccgcgcag
aagaacgtggacatcgccacccgcgcctaccagcgcggcctgaccgattacctcaacgtc
ctgcaagcgcaaacccaatggctgcgccagcagcagatcgtgcagcaattgcaggcgcaa
cgcctggcctcctatgccgccctgcagaccgccctgggtggcggcatgcaggacggcagc
agcgcccctgccgaagtggccgcgcaatga
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