Herbaspirillum sp. DW155: HBDW_28160
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Entry
HBDW_28160 CDS
T10195
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
hew Herbaspirillum sp. DW155
Pathway
hew01501
beta-Lactam resistance
hew02024
Quorum sensing
Module
hew_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HBDW_28160
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HBDW_28160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hew02000
]
HBDW_28160
01504 Antimicrobial resistance genes [BR:
hew01504
]
HBDW_28160
Transporters [BR:
hew02000
]
Other transporters
Pores ion channels [TC:
1
]
HBDW_28160
Antimicrobial resistance genes [BR:
hew01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HBDW_28160
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
HBDW_28160
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
HBDW_28160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Sec8_N
Ead_Ea22
Motif
Other DBs
NCBI-ProteinID:
BEV16028
LinkDB
All DBs
Position
complement(3102098..3103606)
Genome browser
AA seq
502 aa
AA seq
DB search
MPSLTPSLRPRPLALACLLTLLAGCAVGPDYHRPGVDMPIAYKEAAGWKQAAPSDDQPRS
AWWQAFGDEQLDALMRQVEISNQNVAQYAAQYAQAQAVVRQADASFYPTVTATASGTRSG
NASGTTGSKTSTSSTTRSGVSNEVSASGSLSWELDLWGKLRRTREEDVASAQASRADLAN
ALLSAQSSLAQDYFALRILDERIALYEKTVAAYTRYASIVENQYAEAQSSRADVAQARNQ
LESAKASMHDLAWQRAQYEHAIAILLGKAPAAFSLPAVIGGQMQVPVTPVGLASTLLERR
PDIASSERSMAKANAAIGVAIAAYYPDLTLSASAGFQNSSASKLFTAPYRFWSLGPSFSQ
TLFDGGSIKAQVEQARASYDAAVASYRQTVLTALGQVEDYLAKMRIMESEMQAQQAATDA
AIVSARVTRDQYEAGKINYLDVATTEATSLSAQQSLWELKGTQLTTSVQLIVALGGGWHA
DEAEASPAVHQTDKKPAKKPAN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgccttctttgactccatcactgcgcccgcgtcccctggccctggcttgcctgctcacg
ctgctggccggttgcgccgtgggtccggactatcatcgtcccggcgtggatatgcccatc
gcctacaaggaggcagccggctggaaacaggcggcaccgtccgacgaccagccgcgcagc
gcctggtggcaagccttcggggatgaacagctcgatgccctgatgcgccaggtcgagatt
tccaaccagaacgtggcgcaatacgcggcccagtatgcgcaggctcaggcggtggtgcgc
caggccgatgccagcttctatcccaccgtcacggccacggccagcggcacgcgcagcggc
aatgcttccggcaccacgggcagcaagaccagcaccagcagcaccacccgcagcggcgtg
agcaatgaggtctcggcctcgggcagcctcagctgggagctggacctgtggggcaagctg
cgccgcacgcgcgaagaagacgtggccagcgcccaggccagccgggccgatctggccaat
gcattgctgagcgcgcagtccagcctggcgcaggattatttcgcgctgcgcattctggat
gagcgcatcgccctgtatgaaaaaacggtggcggcctacacccgctatgccagcatcgtc
gagaaccagtatgccgaggcccagtcgtcccgcgcggacgtggcgcaggcgcgcaaccag
ctggagtcggccaaggcctccatgcatgacctggcctggcagcgtgcgcagtacgagcac
gccatcgcgatcctgctgggcaaggcgccggcggcgttttcgctgcctgccgtcatcggc
ggccagatgcaggtgccggtcacgccggtggggctggcctccacgctgctggagcgacgc
ccggacatcgcgtcctccgaacgcagcatggccaaggccaatgcggccatcggggtggcc
atcgcggcctattatccggacctgacgctctcggccagtgccggcttccagaacagcagc
gccagcaagctctttacggcgccgtatcgcttctggtcgctcggtccctcgttcagccag
acgctctttgatggcggctccatcaaagcccaggtcgaacaggcccgcgccagctacgat
gcggcggtggccagttatcgccagacggtgctgacagccctggggcaggtggaagactat
ctggccaagatgcgcatcatggaatccgaaatgcaggcccagcaggccgccacggatgcc
gccatcgtctcggcccgggtcacgcgcgatcaatacgaggcgggcaagatcaattatctg
gacgtggccaccaccgaggccaccagcctctccgcccagcaaagcctgtgggaactcaag
ggtacgcagctgactaccagcgtgcagctgatcgtcgccctgggcggcgggtggcatgcc
gatgaagctgaggcatcgcccgcagtccatcagaccgacaagaaaccggccaagaaaccg
gccaattga
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