Herbaspirillum sp. DW155: HBDW_35890
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Entry
HBDW_35890 CDS
T10195
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
hew Herbaspirillum sp. DW155
Pathway
hew01501
beta-Lactam resistance
hew01503
Cationic antimicrobial peptide (CAMP) resistance
hew02020
Two-component system
hew03070
Bacterial secretion system
Brite
Transporters [BR:
hew02000
]
Other transporters
Pores ion channels [TC:
1
]
HBDW_35890
Secretion system [BR:
hew02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HBDW_35890
RTX toxin transporter
HBDW_35890
Multiple protein transporter
HBDW_35890
RaxAB-RaxC type I secretion system protein
HBDW_35890
Antimicrobial resistance genes [BR:
hew01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HBDW_35890
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HBDW_35890
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BEV16801
LinkDB
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Position
3993914..3995383
Genome browser
AA seq
489 aa
AA seq
DB search
MNVRAFSTLLVAAVLTSVAHTTHAREWLERAATPIDDPLLARPPELDEGKLLPGDAQPLA
CDGRTAVPAGPLSLGDAVDLGLCHHAQVRAAWARIKVQAAQKGEASAAYLPSINAGLRYQ
QERVRQPDALLPLDSQRKTRSQYYTLTWRLLDFGGRSANLRAADALLDAALASHDAILQK
TMTSVIAAYYEVQTAGANRQARELNERLTRQIMETTHKRAERGMAARSDLLQAQTSLSKA
ELEHARAIGQHEKALVSLSVSLGLRGQGPRLQVPIDSPDSVIEAGQIAQDLVQWMETARQ
QHPALLASRAQLASSREKLAATRAEGLPSLDFSHGYYVNGRPNQGSSGTQTRETVSALSL
NFPLFDGFSHTYKVRNAQAQIDLKEAELLDAEGQVISELANAYAENEAAQRNLVSSRRLL
ESARMALDDVQRKYERGLSDIIAILNVQAALADASQERIRALAEWRSARLRLLAGAGELG
RTRVAEQGK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttagagctttttccacattgctcgtggcagcggtgctgacatcggttgcccac
acgactcacgcacgggaatggctggagcgggctgcgacgccgattgacgatcccttgctg
gcccgcccaccggaactggacgagggcaaattgctcccgggtgacgcccagccgctggct
tgtgatggccgcactgccgtaccggccgggccgctcagcttgggggatgccgtcgacctg
ggcttgtgtcaccacgcccaagtgagggccgcatgggcgcgcatcaaggtgcaggcggcg
cagaagggcgaagcgagcgcggcctatctgcccagcatcaacgccggactgcgctatcag
caagaacgcgtacgccagcctgatgcgctgctgccgctggacagccagcgcaagacccgc
tcgcagtactacacgctgacctggcgcctgttggacttcggtggcaggagcgccaacctg
cgcgccgccgatgccttgctcgacgccgcgctggccagtcatgacgccatcttgcagaag
accatgaccagcgtcattgcggcctattacgaagtgcagaccgccggcgccaatcgccag
gcgagagaactgaacgaacgcctgacacgccagatcatggagaccacccacaagcgcgcc
gaacggggcatggcggcccgttcggacctgctgcaagcgcagacttccttgtccaaggcg
gagctggaacatgcgcgtgccatcggccagcatgaaaaggccctggtcagcttgtcggtc
tcattgggacttcgagggcaagggccacgcctgcaagtgcccatcgacagtcccgattcg
gtcatcgaggccggtcagatcgcgcaggatctggtgcaatggatggagacggcgcgccag
caacatccggccttgctggcatcgagggcacagctggcatcgtcgcgcgagaagctggcg
gccacgcgcgccgagggcttgcccagtctggatttttctcacgggtactacgtcaacgga
cgtcccaatcaggggagttcgggcacgcaaacacgcgagacggtgagcgcactgtccttg
aacttcccgctcttcgacggcttctcccacacttacaaggtacgcaacgcacaggcgcag
atcgacctgaaggaagccgaactgctcgacgccgagggacaggtcatcagcgaactggcc
aatgcatacgcagaaaatgaggccgcccaacgcaatctggtatcgtcccggcgtctgctg
gaaagcgcaaggatggcgctggacgacgttcagcgcaaatatgaacgcggactcagcgac
atcatcgccatcctcaatgtacaggctgcactggccgatgcaagccaggagcgcatccgc
gccctggccgaatggcgttcagcacgattgaggctgctggctggcgccggggaattggga
cgtacgcgggtcgctgaacagggcaagtaa
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