Hydrogenobaculum sp. HO: HydHO_0007
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Entry
HydHO_0007 CDS
T02482
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
hho
Hydrogenobaculum sp. HO
Pathway
hho01501
beta-Lactam resistance
hho02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hho00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HydHO_0007
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HydHO_0007
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hho02000
]
HydHO_0007
01504 Antimicrobial resistance genes [BR:
hho01504
]
HydHO_0007
Transporters [BR:
hho02000
]
Other transporters
Pores ion channels [TC:
1
]
HydHO_0007
Antimicrobial resistance genes [BR:
hho01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HydHO_0007
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
HydHO_0007
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
HydHO_0007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
T7SS_signal
TEBP_beta
Motif
Other DBs
NCBI-ProteinID:
AGG14348
UniProt:
M1QGS7
LinkDB
All DBs
Position
complement(6232..7611)
Genome browser
AA seq
459 aa
AA seq
DB search
MRKAIVVIGIGALILNSCAFYAKPTNVSIKYPSAFKEKLPNQELNTNLKDWWKTFNDKTL
DYYVDLALKNNPNYLIALKNIELSKAYVLENSSVLFPSFNLNASGTKQQLSRRTPTGKFF
SIAPYTTYNLSVSASYEIDLFAKALNAYRYYKENVKITKEEAKAIKNALIMNTVNNYYQI
VENAHYIKLLEKEINIAKKNLELAKTNYKAGLTSYQSVDQAKSSLLNLEQTLETYKAQRK
VLVNAFAYLLGEYPEDFKFSIYGTLPKDFAIPKAIPSTVLITRPDVKEAMYNVISSAYQK
KVALANFFPSFDLTGSYGFQSQQLNNLVTQPSISWNFGLNIIEPILNWNQNLGLYKASKV
ALAQSILNYRQTVLNAFKEVDDAIAQYKTDDINYKSLKKTYQTTLDQYRIALANYKAGLT
PYSNLLNYRTNLIESKKALLDQKLKLIQDISSLYNVLGY
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggctatagttgttatcggtataggagctttgatattaaactcttgtgctttt
tacgcaaaaccaacaaatgtatctataaaatatccaagcgcttttaaagaaaagctacca
aaccaagaactaaataccaatctaaaagattggtggaaaaccttcaacgataaaaccctt
gattactatgtagatttggctctaaagaacaatccaaattaccttatagctcttaaaaat
atagaactatcaaaagcttatgtgcttgaaaactcatctgtgctttttccaagttttaat
ctaaacgcctctggtaccaaacaacaactatccaggcgcacacctactggaaaatttttc
agtatagcgccctataccacctataacctttccgtaagcgcctcttatgagatagatctt
tttgcaaaagctctaaacgcctatagatactataaggaaaatgtaaaaataacaaaagaa
gaagccaaagccatcaaaaacgcccttatcatgaatacagtaaacaactactatcaaata
gtagaaaacgcccattatataaagcttttagaaaaagaaataaatatagcaaagaaaaac
ttagagttagcaaaaacaaattacaaagcagggcttacatcttatcaaagtgtagaccaa
gctaaaagctcattgctaaatttagaacaaacgttagaaacctataaagctcaaagaaaa
gtgttggtaaatgcctttgcttatcttttgggagaatatccagaagactttaaattttct
atatacggtacgttgccaaaggattttgccataccaaaagcaataccctccacagtgctc
attacaagaccagacgtcaaggaggctatgtataacgtaatatcaagcgcttatcaaaag
aaagtggctttagcaaacttctttccatcttttgacctcactggtagctacggctttcaa
tcccagcagctaaataacctcgtgacccagccaagcatatcttggaattttggcctaaac
attatagaacctatactaaactggaatcaaaacttaggtttatacaaagcgtcaaaagta
gctttggctcaaagcatattaaactatagacaaactgttttaaacgcttttaaggaagtg
gacgatgccatcgcccaatacaaaacagatgatattaattataaaagcctaaaaaagaca
tatcaaacaacgctggatcaataccgcatagcgctcgcaaattacaaagcaggacttact
ccttacagcaatctactcaattatagaacaaatctaattgaatctaaaaaagccctttta
gatcagaaactaaaacttatacaagatatatcgtctttatacaacgtattggggtattaa
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