Hydrogenovibrio marinus: HVMH_2296
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Entry
HVMH_2296 CDS
T06677
Name
(GenBank) channel protein TolC
KO
K12340
outer membrane protein
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar01501
beta-Lactam resistance
hmar01503
Cationic antimicrobial peptide (CAMP) resistance
hmar02020
Two-component system
hmar03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HVMH_2296
09132 Signal transduction
02020 Two-component system
HVMH_2296
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HVMH_2296
01503 Cationic antimicrobial peptide (CAMP) resistance
HVMH_2296
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hmar02000
]
HVMH_2296
02044 Secretion system [BR:
hmar02044
]
HVMH_2296
01504 Antimicrobial resistance genes [BR:
hmar01504
]
HVMH_2296
Transporters [BR:
hmar02000
]
Other transporters
Pores ion channels [TC:
1
]
HVMH_2296
Secretion system [BR:
hmar02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HVMH_2296
RTX toxin transporter
HVMH_2296
Multiple protein transporter
HVMH_2296
RaxAB-RaxC type I secretion system protein
HVMH_2296
Antimicrobial resistance genes [BR:
hmar01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HVMH_2296
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HVMH_2296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
FliC
Motif
Other DBs
NCBI-ProteinID:
BBN60702
LinkDB
All DBs
Position
complement(2465212..2466537)
Genome browser
AA seq
441 aa
AA seq
DB search
MKSLLKQAVHTVAVALMLVASSAFAEPQMAVTAPEKVLQKDAQLMQLYQTALSNNPNLAV
FSAQAQGALSQQKQAASYEKLQVQLQSELSYAWMKKKDFGRTANQLKASYPLYQPDKTDL
TQVATFQHDAAQWQLESQRQKLMLQLSELYYRYWSQQAQVDFLVKEQTSISSIMTQVRKR
FQVGYQDLNDIAEIRARLDNNRADLLAAKQALAITESDLSALVGESVDLHRMKMPEDLPS
DTLLNRVSSSQKVDAKIQPDWLLQNPQVKALEQQIMAANRQVDYEKNKNGVQLDAFGAYV
YNDSDGNYYDDMQGVKGGLELKYPLYLGGRTDAAVSKSRAQVSAAQAQKRQLVLQLEATI
RNSLLSYQAGVERLAALKAALSSNQEAVKATENGLRTGTRNILDLLNAQRSLHKAQRDVP
LTKAKIWQSWFEFYGALGLLK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtttattgaaacaagccgtacatacggtggcagtcgctttgatgttggttgca
agctcggcctttgccgagccgcaaatggcggtgacagcgccggaaaaagtgctgcaaaaa
gatgcgcagttgatgcagttataccaaaccgctttaagcaataaccccaacctagcagtt
ttttcggcacaggcgcagggggcgttgagccaacagaaacaagcggcatcctatgaaaaa
cttcaggttcagctgcaatcagagttgagttatgcctggatgaagaaaaaggacttcggg
cgtaccgccaaccagttgaaggcaagctatcctttgtatcaaccggataaaaccgatttg
acgcaagtggcgacttttcaacatgatgcggcgcaatggcagcttgaatcccaaagacaa
aagctgatgttgcaactgtccgagctttattaccgctattggtcgcagcaggcgcaagtg
gactttttggtcaaagagcaaacgtccatttcttcaatcatgacgcaagtgcgtaagcgc
tttcaggttggttatcaagatttgaacgatatcgccgagattcgcgcaaggctggataac
aaccgtgctgatttgctggcggctaagcaggcgttggcgattaccgagtcggatttatct
gctctagttggagaatcggtcgatttgcatcgaatgaagatgccggaggatttgccgagt
gatactttgcttaatagagtgtcgtccagccagaaagtagatgccaaaattcaaccggat
tggttgttgcagaatccacaggtgaaagctttggagcaacagatcatggcagctaaccga
caagtggattatgaaaaaaacaagaatggtgttcagctagatgccttcggtgcttatgtg
tataacgatagtgatggcaattactacgatgatatgcaaggtgtcaaaggcggcttggag
ttgaagtatcctttgtacctcggcggccgaaccgatgctgcggtttccaagtctcgcgct
caagtgtctgcggcacaagcgcagaaacgtcaattggtgttacaactggaggcaaccatc
agaaacagtttgctcagttatcaagccggtgttgaacgccttgctgctttgaaagcagca
ctgtcatccaaccaagaagcggtaaaagccacagaaaacggtttgcgcaccggcacgcgg
aatattctcgacttgctcaatgcgcaacgtagcttgcacaaagctcaacgagatgtgcct
ttgaccaaagcgaagatttggcaaagctggtttgagttttatggcgctttgggcttgttg
aaataa
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