Hyphomicrobium sp. MC1: HYPMC_2709
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Entry
HYPMC_2709 CDS
T01557
Name
(GenBank) putative RND efflux transporter, OMP subunit
KO
K12340
outer membrane protein
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc01501
beta-Lactam resistance
hmc01503
Cationic antimicrobial peptide (CAMP) resistance
hmc02020
Two-component system
hmc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HYPMC_2709
09132 Signal transduction
02020 Two-component system
HYPMC_2709
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HYPMC_2709
01503 Cationic antimicrobial peptide (CAMP) resistance
HYPMC_2709
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hmc02000
]
HYPMC_2709
02044 Secretion system [BR:
hmc02044
]
HYPMC_2709
01504 Antimicrobial resistance genes [BR:
hmc01504
]
HYPMC_2709
Transporters [BR:
hmc02000
]
Other transporters
Pores ion channels [TC:
1
]
HYPMC_2709
Secretion system [BR:
hmc02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HYPMC_2709
RTX toxin transporter
HYPMC_2709
Multiple protein transporter
HYPMC_2709
RaxAB-RaxC type I secretion system protein
HYPMC_2709
Antimicrobial resistance genes [BR:
hmc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HYPMC_2709
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HYPMC_2709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
CCB65926
LinkDB
All DBs
Position
complement(2551695..2553158)
Genome browser
AA seq
487 aa
AA seq
DB search
MAKTKSNQLSRRDATSVQRRTLTTFIALAAYAAFSTDVSAETLIDTLSATYQYSPTLDAA
RAQQRARDEDIARANSGYRPDINASANVGRERTRTVSPVPGTTGTNVGSPRGYAIDLVQP
LFTGFQVTNAVNAAEANDRAGRETLRSTEQQVLLDAVTAYGDVTRDQAIVKLNENNLKFL
DAELKAQRDRFAVGEVTKTDVAQSEARRALGQSDLDQARANLKSSRAIFEQVVGHPPYNL
IEANPNTKLVPRSLQDAIAIGTKENPIVVQALYSEQAARYTVDQVRGQLLPQAQLEANYT
DQYDPSEGIDQGTSASVVASVTVPLYAQGGEVFAQVRQAKHNHIAALQQIEVQRASAQSQ
VVQAWSQLVGFKAQAESDKASIVANTTALNGVREEERVGQRTVLDVLNAQQELLQSQVNL
ETTKRNILVASYTLVSAIGRLSVSEVGAATAVYNPEVHYQQVRSKWWGIDITHGDGRREH
VDVAPAK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
ttggctaagacaaaatcaaatcaattgtcccgtcgcgatgcgacttcggtccaacgtcgc
acgttgactacattcatcgctttggcggcctatgccgctttttcgactgacgtcagcgct
gaaacgctgatcgatacgctctcagcgacataccagtacagcccgacgctcgatgcggcc
cgcgcgcagcagcgtgcgcgagacgaagacattgctcgtgcgaactccggctatcggcct
gacatcaacgcctcggcaaatgtcggccgtgagcgcacgagaacggtttctccggtgcca
ggaacgacggggacgaacgtcggttctccgcgtggatatgcaattgatctcgtgcagccg
ctgttcaccgggttccaggtcaccaacgccgtcaatgcggccgaagcgaatgaccgtgcc
ggccgtgaaacgttgcggagcaccgaacagcaagttctgctcgatgcggtgacagcctac
ggcgacgtcactcgcgatcaggcgatcgtcaagctgaatgaaaacaacctcaagtttctc
gacgccgaactgaaagctcaaagagaccgtttcgccgtcggtgaagtgacgaagacggac
gttgcgcagtcggaagctcgccgcgctctcggtcagtcggacctcgatcaggcgcgcgcc
aatttgaagtcgagccgtgcgatcttcgagcaggtcgtggggcatccgccctacaacttg
attgaggccaatccgaacaccaagcttgtgccgcgatcgctgcaggacgccatcgcgatc
ggtacgaaagaaaatccgatcgtcgtgcaggcgctctattcagaacaggccgcccgctac
acagtcgatcaggttcgcggccagttgctgccccaggcgcaactcgaagccaactacacc
gatcagtacgacccgtcggaaggcatcgatcagggaacgtctgcatccgttgtcgccagc
gttactgttccgctttatgcgcagggcggcgaagtcttcgctcaggttcgccaagccaag
cacaaccatattgccgcgcttcagcagatcgaggtgcagcgtgcttcggcccaatcgcag
gtggttcaggcttggtcacagctcgtcggcttcaaggcccaggctgaatcggacaaggcg
tcgattgttgccaacaccactgctttgaacggcgtccgcgaagaagagcgggtcggtcag
cgtacggttctcgacgtcttgaacgcgcagcaggaattgctgcagtcccaggtcaacctc
gagaccacgaagcgcaacattctcgtcgcgtcgtatacgctggtttcggcaatcggacgc
ctcagcgtctcggaagtcggcgccgcaacggccgtctacaatcccgaagtccactaccag
caggttcgcagcaagtggtggggtatcgatatcacccacggcgacggccgccgggaacac
gtggatgtcgcaccggccaagtaa
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