Vreelandella neptunia: SR894_05925
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Entry
SR894_05925 CDS
T09634
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
hnp
Vreelandella neptunia
Pathway
hnp01501
beta-Lactam resistance
hnp01503
Cationic antimicrobial peptide (CAMP) resistance
hnp02020
Two-component system
hnp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SR894_05925
09132 Signal transduction
02020 Two-component system
SR894_05925
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SR894_05925
01503 Cationic antimicrobial peptide (CAMP) resistance
SR894_05925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hnp02000
]
SR894_05925
02044 Secretion system [BR:
hnp02044
]
SR894_05925
01504 Antimicrobial resistance genes [BR:
hnp01504
]
SR894_05925
Transporters [BR:
hnp02000
]
Other transporters
Pores ion channels [TC:
1
]
SR894_05925
Secretion system [BR:
hnp02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SR894_05925
RTX toxin transporter
SR894_05925
Multiple protein transporter
SR894_05925
RaxAB-RaxC type I secretion system protein
SR894_05925
Antimicrobial resistance genes [BR:
hnp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SR894_05925
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SR894_05925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF5790
Surfac_D-trimer
Motif
Other DBs
NCBI-ProteinID:
WQH14074
LinkDB
All DBs
Position
1290917..1292407
Genome browser
AA seq
496 aa
AA seq
DB search
MPKIPSQQRFVRVMGAWSRTVPLALTVSLIASPLYAQQDMPAGGAAMEELAALEQASRSP
AALPSLPALFGRALEHDADLSRQRYELEATREEIPMARSQLLPQVSATGGYLWQDSTNIQ
TSPDDFGLDQPAQRPGEIEENYWQVQLQQPLFSLERWRGMDVADAQVNAAELQLAVVERD
LALQVSEAYVQAYLASQRLGLLESQQESLELQVRQAQRAYDLGVGDRINLLEAQSRLDQA
ISDAVQAENELDNALSILERLTGTLPEFRGLAIGELSEVSLNSEWGAQDDWLARTGQNLD
VLLARQEQRISEADASTRRAGYYPEVNLNLSYSDRTSDDVLRESEDYRAGVEMSVPIYRG
GYTTANVRQGEKRINASQAAFDNQRNLAGQEVRQRLRSLNGHVRRIEALKQAIASSQLFL
EAAERGEQLGLRDLVDVLDARASLYDQRIQYVDTIGEYALDSLALQSAVGELGSDDLGNV
MTLLLSLTDLTATTSG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaatacccagccaacaacgattcgttcgggtaatgggcgcctggtcacgcacg
gtaccgctggccctgacggttagcctaatcgcttcaccgctctacgcacagcaggatatg
ccagcagggggcgccgccatggaagagctggctgccctggagcaggccagccgctctccc
gcagcgctaccctcgctaccggcgctttttggccgtgcgctggagcatgacgcagacctc
tcccgccagcgctatgagctagaagccacccgggaagagatccccatggcgcgttcacag
ctactgccccaggtaagcgccaccggtggctacctctggcaggactccaccaatatacaa
acatcaccggacgattttggcctcgaccaacccgcccagcggcccggtgaaattgaagag
aactactggcaggtgcagctacagcaaccactttttagtctagagcgctggcgcggcatg
gatgtagccgacgcccaggtaaacgccgccgaactccagctggccgtggtagagcgtgac
cttgcactgcaagtcagcgaagcctacgtacaggcctatttggcctctcagcgccttggt
ttattagagtctcagcaagaatcactggaattacaggttcgtcaggcgcagcgcgcctac
gacctcggtgtaggtgaccgcatcaacctgctggaagcgcagtcacgactagaccaggcg
atttcagacgccgtacaggcagaaaatgagcttgataacgccctgagcatcctggaacgc
ctaaccggcacgctgcccgaatttcgcggtctagccatcggcgaactgtccgaggtctct
ctcaacagcgaatggggtgcccaggacgactggctagcccgcaccgggcaaaacctggat
gtgctgttagcgcgccaggagcagcgtatctcagaagccgacgccagcacccgccgggcg
ggctactacccagaggtaaacctcaacctcagctactccgaccgcacaagcgacgacgta
ctgcgcgaaagtgaagactaccgcgccggtgtcgagatgagcgtgccgatttatcgcggc
ggttacaccactgccaatgtacgccaaggcgaaaaacgcattaatgccagtcaggcagcg
tttgataaccagcgcaatttggccgggcaggaagtccgccagcggctacgttctttaaat
ggccatgtgcgccgtattgaagcgctcaaacaagccatcgcctccagccagctattttta
gaagccgccgagcgaggcgaacagctgggtctgcgtgatttggtagacgtactcgacgcc
cgcgccagtctctacgaccagcgcatacagtatgtggataccattggtgagtacgccctg
gacagtttagcgcttcagtcagccgtaggggagctgggcagtgatgacttgggtaatgtg
atgacactgctgctatcgttaactgatctaaccgctaccacgtcaggataa
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