Halomonas profundus: LMS44_06280
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Entry
LMS44_06280 CDS
T08361
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
hpro
Halomonas profundus
Pathway
hpro01501
beta-Lactam resistance
hpro01503
Cationic antimicrobial peptide (CAMP) resistance
hpro02020
Two-component system
hpro03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LMS44_06280
09132 Signal transduction
02020 Two-component system
LMS44_06280
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LMS44_06280
01503 Cationic antimicrobial peptide (CAMP) resistance
LMS44_06280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpro02000
]
LMS44_06280
02044 Secretion system [BR:
hpro02044
]
LMS44_06280
01504 Antimicrobial resistance genes [BR:
hpro01504
]
LMS44_06280
Transporters [BR:
hpro02000
]
Other transporters
Pores ion channels [TC:
1
]
LMS44_06280
Secretion system [BR:
hpro02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LMS44_06280
RTX toxin transporter
LMS44_06280
Multiple protein transporter
LMS44_06280
RaxAB-RaxC type I secretion system protein
LMS44_06280
Antimicrobial resistance genes [BR:
hpro01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LMS44_06280
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LMS44_06280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
IFT57
Motif
Other DBs
NCBI-ProteinID:
UEQ05474
LinkDB
All DBs
Position
1373593..1375056
Genome browser
AA seq
487 aa
AA seq
DB search
MRLAHWAVNAPLRPLLLAVFTASFVLPAQAADLITITRDALDNNAELASARSEYLGVEAG
RDVARGGLLPQINASGTVAHNEQYESQGSSRAGTGAGTGNVSAGDDRYNTVALTLEATQA
LYDEVTRRQVTQAERQIDQQVYLLAATEQQLLIDVASAYFDILRAYEVLEARFAQERAIG
RQLEQAGEQFEVGLIAITEVEEARATFDQSRADRIAAESNLQVAFEALEQLTGQRYASIE
ALGDSMPVALPEPSNRDYWVEQAIERNPQVLAQQAGIEVSRSGVEIARAGRLPTLSAFGN
YQYGDSDIDNTTGNDSSSQVGIRANLPIYTGGSTSASIRQGTYQLESSQYDFESQRRSSI
QQVRSLYTQVSNDVETIEAREQAIVSNRSALEATRAGYEVGTRNIVDVLNAEQNLYNAIA
NYAEARYDYVVNLLTLRQQAGRLDVDAIEEVNAWLTGDEVNFTLPESGGNDRYESALNIG
APPQPGM
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcgactggcacactgggcagtcaatgcccctttacgacccctactgttagcggtattc
accgcttcttttgtattgcctgctcaagctgctgatctcatcacgattacccgtgatgcg
ttagacaacaacgctgagcttgcttcggcgcgctcggagtatttgggtgttgaagcaggc
agagacgttgcccgcggtgggttactcccccaaattaacgcctcgggcaccgtggcgcac
aacgagcagtatgaaagccagggttcatcccgagcgggaacaggggctggaacgggtaat
gtgagcgccggtgatgaccgttacaacaccgtagcgctcacccttgaagccacccaagcg
ctttatgatgaggtcacgcgccgccaagtcactcaggccgagcggcagattgaccagcag
gtatacctgctggcagctaccgaacagcagctattaattgacgtggccagcgcctatttt
gatattttgcgggcttatgaagtactcgaagcgcgttttgcccaagagcgagccattggc
cgtcagcttgaacaggccggtgagcagtttgaggtcggtttgattgcgattaccgaagtc
gaagaggcccgggctacctttgaccagtcccgtgctgatcgcattgccgcagagagcaac
ctgcaggtggcatttgaggcactggagcagctgaccggccagcgctacgccagtattgaa
gcgttgggcgacagtatgccagtcgccctccctgaacccagcaaccgggactactgggta
gagcaagccattgagcgcaatcctcaggtattggcgcaacaggcggggattgaagtatca
cgcagcggtgtggaaattgcccgcgcgggacgattgcccaccctttcagcttttggcaac
tatcagtatggcgacagtgatattgataacaccaccgggaatgactcctctagccaggtg
ggcatacgcgctaatttacccatctacaccggcggcagtaccagcgccagcatccgccag
gggacttatcaacttgaaagcagccagtatgatttcgagtcccagcgtcgttcgtcgatc
cagcaggtgcgctcgctgtatacccaagtcagcaacgatgtggaaaccatcgaggcccgt
gagcaggcgatcgtctctaaccgcagcgcgctggaagcaacccgcgctggctacgaggtt
ggcacccgtaacatcgtggatgttttgaacgctgagcagaatttgtataacgccatcgcc
aactacgccgaggctcgctacgactacgtagtgaatttgctcacgcttcgtcagcaggcc
gggcgcctggacgtggacgccattgaagaagtcaatgcatggttaaccggcgatgaggtg
aatttcaccttgccagagagcggtggcaacgaccgctatgagtctgcgctcaacatcggt
gcaccgccccagcctggcatgtaa
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