Herbaspirillum rubrisubalbicans: Hrubri_1173
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Entry
Hrubri_1173 CDS
T04238
Name
(GenBank) outer membrane drug efflux lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb01501
beta-Lactam resistance
hrb02024
Quorum sensing
Module
hrb_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hrubri_1173
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Hrubri_1173
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_1173
01504 Antimicrobial resistance genes [BR:
hrb01504
]
Hrubri_1173
Transporters [BR:
hrb02000
]
Other transporters
Pores ion channels [TC:
1
]
Hrubri_1173
Antimicrobial resistance genes [BR:
hrb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Hrubri_1173
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Hrubri_1173
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Hrubri_1173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
UIM
Motif
Other DBs
NCBI-ProteinID:
ALU88385
LinkDB
All DBs
Position
1375114..1376625
Genome browser
AA seq
503 aa
AA seq
DB search
MNFSLTRSARFQRDLQPQPRARLLPLLLAVLLGGCTLMPDYHRPDAPVAARFAGDNSAPA
AQSAAVADIGWRDVFTDPALQQVIAMSLANNRDLRVAVLNIEKARAQYGVERAALFPTIN
AATSESASRTPADLSTTGSALTARSYSATLGFSAYELDLFGRVRSLKEQALQSFLSTAEA
RRSTQISLIAEVATAWLTLASDQDRLRLAKDTLQSQSATYQLTQRSVELGSSSALTLRQV
QTSVESARVDVESYTAQVDQDRNALVLLVGKDLPDTLLPHGLPDTALAAASPLATLPPGL
PSELLQRRADIVQAERDLKAANANIGAARAAFYPSISLTADAGTASARLAGLFKGGSGSW
SFVPQISLPIFDGGANRANLDIATISRDISVAQYEKAIQTAFREVSDALAQRNTLGRQLA
AQESLVEASGAAYDLSQARFKSGVDSYLDVLDSQRSLYSAQSNLIGTRLSRWTNLVTFYK
VLGGGWVERTGTPVASDVATAQP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttccctgacccgatcggcccgttttcagcgtgacctccagcctcagcctcgt
gcgcgcctgctgcccctgttgctggccgtgctgctgggcggttgcaccctgatgccggac
tatcatcgccctgacgcgccggtggccgcccgctttgccggcgacaacagtgcgcctgcg
gcccagtccgcggccgtggccgacatcggctggcgtgacgtcttcaccgacccggccttg
cagcaggtcatcgccatgagcctggccaacaaccgcgacctgcgcgtggccgtgctcaac
atcgagaaggcacgcgctcagtatggggtcgagcgcgccgccctgttccccaccatcaat
gccgccaccagcgaatcggccagccgcacgccggccgatctgtccaccaccggcagcgcg
ctgacggcccgcagctatagcgccacgctcggtttcagcgcctatgaactggatctgttt
ggacgcgtgcgcagcttgaaggaacaagccctgcaatccttcctctccaccgccgaggcg
cgtcgcagcacccagatcagcctgatcgccgaagtcgccacggcctggttgacactggct
tccgaccaggatcgcctgcgcctggccaaggacacgttgcaaagccagagcgccacctac
cagctcacccagcgcagcgtcgaactgggctcttcctcggcgctgaccttgcgccaggtg
cagaccagcgtggagagcgcgcgtgtggatgtggagagctataccgcccaggtcgaccag
gatcgcaatgcgctggtgctgctggtgggcaaggacttgcccgataccttgctgccgcat
ggcttgcccgatacggccctggccgccgccagccccttggcgacgctgccgcccggactg
ccgtcggaactgttgcagcgtcgtgccgacatcgtccaggccgagcgcgacctgaaggcc
gctaatgccaacatcggggccgcgcgcgcggccttctatcccagcatcagcctgaccgcc
gatgccggcactgccagcgcgcgcctggcgggcctgttcaagggcggctcgggatcgtgg
agcttcgtgccgcagatttcgctgccgatcttcgatggcggggccaatcgtgccaacctg
gacattgccaccatcagccgcgacatctccgtggcccagtacgagaaggccatccagacc
gccttccgcgaagtctccgatgccctggcccagcgcaacaccctgggacggcaactggcc
gcgcaagagtcgctggtagaggccagcggcgcggcctatgacctttcgcaggcgcgtttc
aagagcggcgtggacagctatctcgatgtcctcgattcgcagcgcagcttgtattcggcg
cagtccaatctgatcggtacccgcctgtcgcgctggaccaatctggtgaccttctacaag
gtcctgggtggcggctgggtcgagcgtaccggcacgcccgtagccagcgacgtggcaacg
gcacagccatga
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