Herbaspirillum rubrisubalbicans: Hrubri_3477
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Entry
Hrubri_3477 CDS
T04238
Symbol
tolC
Name
(GenBank) Outer membrane efflux channel lipoprotein, type I secretion system
KO
K12340
outer membrane protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb01501
beta-Lactam resistance
hrb01503
Cationic antimicrobial peptide (CAMP) resistance
hrb02020
Two-component system
hrb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Hrubri_3477 (tolC)
09132 Signal transduction
02020 Two-component system
Hrubri_3477 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Hrubri_3477 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
Hrubri_3477 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_3477 (tolC)
02044 Secretion system [BR:
hrb02044
]
Hrubri_3477 (tolC)
01504 Antimicrobial resistance genes [BR:
hrb01504
]
Hrubri_3477 (tolC)
Transporters [BR:
hrb02000
]
Other transporters
Pores ion channels [TC:
1
]
Hrubri_3477 (tolC)
Secretion system [BR:
hrb02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Hrubri_3477 (tolC)
RTX toxin transporter
Hrubri_3477 (tolC)
Multiple protein transporter
Hrubri_3477 (tolC)
RaxAB-RaxC type I secretion system protein
Hrubri_3477 (tolC)
Antimicrobial resistance genes [BR:
hrb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Hrubri_3477 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Hrubri_3477 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ALU90636
LinkDB
All DBs
Position
4072602..4074071
Genome browser
AA seq
489 aa
AA seq
DB search
MNVRPVCVILTAAALACLTEMAHGREWLDRAATPIEDPLLARPPELDEGKLLPGDAQALA
CDGRFAVPTAPLTLGDAIDLGLCHHAQVKASWARIKVQAAQKGEARAAYLPSINAGLRYQ
QERVRQPDSLLPLDSQRKTRSQYYTLTWRLLDFGGRSANLRAADALLDAALASHDAILQK
TMTSVIAAYYDVQTAAANRQARELNERLARQIMETTHKRAERGMAARSDLLQVQTSLSKA
ELEHARAIGQHEKALVTLSISLGLRGQGPHLQVPIDSPDSAIEAGQIAQDLVQWMETARQ
QHPALRASRAQLASSREKLAATRAEGLPSLDFSHGYYVNGRPNQGSASTQTRETVSALSL
NFPLFDGFSHTYKVRNAQAQIDLREAELLEAEGQVISELANAYAENEAAQRNLVSSQRLL
DSAKMALEDVQRKYERGLSDIIGILNVQAALADASQERIRALAEWRSARLRLLASAGELG
RTRVAEQGK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttagacctgtctgtgtgatcctgacggcggcagcgctggcatgcctgacggag
atggctcacggacgtgaatggctagatcgcgccgcgacacctattgaggatcccttgttg
gcgcgtccaccggaactggacgagggcaaattactgccgggtgatgctcaggcgctggcc
tgcgatggccgctttgccgtcccgactgcgccgctcacattgggagatgccatcgacctg
ggcttgtgtcatcacgcccaggtgaaggccagctgggcgcgcatcaaggtgcaagcggcg
cagaagggcgaagccagggcggcctatttgcccagcattaacgctggactgcgctatcag
caagagcgcgtacgccagcccgattcgctgctgccgctggatagccaacgcaagacccgc
tcgcagtactacacgctgacctggcgcctgttggacttcggtggccgtagcgccaacctg
cgcgccgccgatgccttgctcgacgctgccctggccagtcatgacgccatcttgcaaaag
accatgaccagcgtcattgcggcctactacgacgttcaaacagccgctgccaatcgccag
gcacgtgaactgaacgaacgcctggcacgccagatcatggagaccacccacaagcgcgcc
gagcggggcatggcggcgcgctcggacctgttgcaagtccagacctccttgtccaaagcg
gaactggaacatgcgcgtgccatcggccaacatgaaaaagccctggtcaccttgtcgatc
tccttgggactgcgaggacagggaccacacctgcaagtccccatcgacagtcccgactcg
gccatcgaggccggtcagatcgcgcaagacctggtgcaatggatggagacggcgaggcag
caacatcctgccttgcgggcatccagggcgcagttggcctcgtcgcgggagaagctggcg
gccacgcgcgccgaaggcttgcccagtctggatttttctcatggatactacgtcaacggg
cgtcccaatcaggggagtgcaagcacgcaaacacgcgagacggtgagcgcgctgtccttg
aacttcccgctcttcgacggtttttcgcacacctacaaggtacgtaacgcgcaggcccag
atcgacctccgggaagcagaactgctggaagcggaggggcaggtcatcagcgaactcgcc
aatgcatacgcagaaaatgaggctgcccaacgcaacctggtctcatcccagcgtctgctg
gacagcgcaaagatggccctggaggacgtccagcgtaaatatgagcgcggactcagcgac
atcatcggcatcctgaatgtacaggccgcactggccgatgcaagccaggagcgtatccgc
gccctggccgaatggcgttcggcccggttgaggctgctggccagcgccggagaactgggg
cgcacgcgggtcgctgaacagggcaagtga
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