Hirundo rustica (Barn swallow): 120764250
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Entry
120764250 CDS
T09369
Symbol
ADAR
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase isoform X1
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04622
RIG-I-like receptor signaling pathway
hrt04623
Cytosolic DNA-sensing pathway
hrt05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120764250 (ADAR)
04623 Cytosolic DNA-sensing pathway
120764250 (ADAR)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
120764250 (ADAR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrt03041
]
120764250 (ADAR)
Enzymes [BR:
hrt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
120764250 (ADAR)
Spliceosome [BR:
hrt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120764250 (ADAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
TrmB
TFIIE_alpha
AlkZ-like
Motif
Other DBs
NCBI-GeneID:
120764250
NCBI-ProteinID:
XP_039944032
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All DBs
Position
29:194300..207855
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AA seq
1166 aa
AA seq
DB search
MIRGTGRGRGLYLTQSNRNFPSTNRGLFNHPCTPRETNQESFLHQQFLTEQDAEVSVLQG
QGSHKESRTRGGRAVAPAPANRCQPSSSRAGWRKFSSQHPWVETLSRCCPPQYRCQENYR
RDSDTVRLNFQRLSLAGQDYEQEILTVFRQLGEGRTCTANDLARKLKTQKKEVNRVLYKL
LREGKLHKGGETPPLWRIASPSSGRERSPTDHSASCTDPACESRGEEQNTLGSGHTEMAE
TKEKICNYLFSVMETTALNLAKNIGFSRAKDVNAFLSALEKLGDVHKQNAIPPRWSLTNR
KREKMQMRLKASTTMQMADSTPSEAGHPSSFVPPCPPEMTATSPEVMASEESVENGQQPL
GQAGQGHVSDKKAEASGDIKPEFSSLSNYDNSENSKWITDDIPDNLNTMNKQPEKSECIM
NSQSSPSYAAPFETAFPCTPVEKLLACQEKNPVSGLTEYSQYTYQHCDFIMLEQNGPSHE
PRFKFQAVINGRRFPPAEAGSKKLAKQEAAANAMKVLMSEVENGRHSEIKCDEPFPSNSM
EPELPLQLEPEQSSTAAHLNLLPGKHPISILMEYGQKSGNIIEFQLLSQEGPPHDPRFSY
CVKMGDQTFPAVVGNSKKGAKQMAAEVAVKILSGESVPHLSSEQPVVKPHSNQSMHNIAT
PDESKVVKTKGVGELIKYLNVNPVSGLLEYARSNGFAAEFKLIDQSGPPHDPKFLCRFVY
QAKVGGRWFPAVTAHSKKQGRQDAADAALRVLIGESEKTEHMEEMSITELPVSGSTLHDQ
MAMLSHQRFNALTARIQHTLLGRKILAAIIMRRGKKGLGVVVSIGTGNRCVKGEELSLKG
ETVNDCHAEIISRRGFVRFLYRELMKYDPSNPSSAEESIFEQAGGKKLRIKSSVTFHLYV
STAPCGDGALFDKSCSDQANEMGQPQHQPLFENSKQGKLRTKVENGEGTIPVESSDIVPT
WDGIQHGERLRTMSCSDKILRWNVLGLQGALLSHFLEPVYLHSVTLGYLYSQGHLARAIC
CRVDRDGSTLREKLQAPYHINHPEVGRVSVYDSARQTGKTKESSVNWCLADESEVEVLDG
TKGKVDGLKLEVSRVSKRKMFTLFRQLCAKNSRRDLLSFSVYSDAKEAATAYQAAKQCFY
STLEELGYGSWIRKPQEEESFSVLDA
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaggcactgggcgaggcagaggcttgtatcttacccagtcaaatcgtaacttc
cccagcactaaccgaggtctttttaaccacccttgtaccccacgagaaactaatcaggaa
tcctttttacaccagcagttcctaacagagcaggacgccgaagtctctgtgttgcaggga
cagggatcacacaaggagtcgcgcaccagaggcgggcgagctgtggcaccagctcctgct
aacagatgtcagcccagctccagtagggctggatggcgtaagttctccagccagcatccg
tgggttgagactttgtctcggtgttgccctccacagtaccgctgtcaggagaactacagg
agagattctgacactgtgaggctgaatttccaaaggctgtctcttgctgggcaagactat
gaacaagaaattctgactgttttcaggcagctcggggaggggaggacttgcacggctaat
gatctggcacgtaaacttaaaactcaaaagaaagaggtcaaccgtgttttgtataaactc
ctcagagaaggcaagttgcacaaagggggagagacaccaccactgtggagaattgccagc
cctagctcagggagagaaagaagccctactgaccacagtgccagttgcacagatccagct
tgtgagagtagaggagaagagcagaacacacttggctcgggacatacagagatggctgag
acaaaggagaaaatctgcaactacttgttcagtgtgatggaaacaacagcactcaatctt
gcaaaaaacattgggttttcgagagccaaggatgttaatgcatttcttagcgctctggaa
aagctgggagatgtccacaagcagaatgcaattccaccacgatggtccctgacaaatagg
aaacgcgagaagatgcagatgaggctgaaggccagcacaacaatgcagatggcagattcc
acaccatctgaggcaggtcatccctcttcctttgtccctccatgtcccccagagatgact
gcaacttctccagaagtgatggcatcagaagaaagtgtagaaaatgggcagcagcctttg
gggcaagctggtcagggccatgtcagtgacaagaaagcagaggcatctggggacattaag
cctgaattctccagtttgagtaattatgataactcagaaaacagcaagtggatcacagat
gatatcccagataatctgaacactatgaacaagcagcctgagaagtcggaatgcatcatg
aattctcagtcttcccccagttatgctgccccgtttgaaactgctttcccatgtacacct
gtagagaaactgctagcttgtcaggagaagaacccagtgagtggccttactgaatattcc
cagtatacataccaacactgtgatttcatcatgctggagcagaatggaccctctcatgag
ccacggtttaagttccaggcagtgattaacgggcgccgattcccaccagcagaagcagga
agcaaaaaattggccaagcaggaggcagcagccaatgcaatgaaggtcctgatgagtgaa
gtggagaatggaaggcacagcgaaattaaatgtgatgaaccatttccctccaacagcatg
gaaccagaactgcctttgcagctggagccagagcagtcatctacagcagctcacctcaac
ctgcttcctgggaagcaccctatcagcatattgatggagtacggtcaaaaatcagggaac
ataattgaattccagctgctctcccaggagggcccacctcacgatcctaggttcagctac
tgtgtgaaaatgggtgaccaaactttccctgctgtggtaggaaacagcaagaagggagca
aagcaaatggcagcagaagttgctgtgaagattctttctggagagtctgtaccccatctc
tcatctgaacagcctgttgtgaagccccacagtaaccagtccatgcacaatatcgccact
ccagatgaatccaaggtggtgaaaacgaagggtgttggggagctcatcaaatatcttaat
gtcaatcctgtcagtggcctgctggaatatgcccgttccaatgggtttgctgcagagttc
aaactcattgaccagtcaggacctccccatgaccccaagtttctttgtaggtttgtctat
caggcaaaggttggaggccgctggttcccagctgtaactgcgcacagcaaaaagcagggc
aggcaggacgcagccgatgcagcgctccgagtcctgattggggagtcagagaagactgag
cacatggaagagatgagcatcactgagctccctgtgagtggcagcaccctgcacgatcag
atggccatgctgagccaccagcgcttcaacgccctcactgctcgcatccagcacaccctg
ctcgggcgcaagatcctggctgccatcatcatgcggagaggaaagaagggcctgggagtg
gtggtcagcatcggaacaggtaatcgctgtgtgaaaggagaagagctaagcttgaagggg
gaaacagtaaatgactgtcacgcagaaataatttctcgaagaggctttgtgaggtttctt
tacagagagctgatgaagtatgacccatctaatccttcctctgcagaagagagcattttt
gagcaagcgggaggaaagaaactcagaataaagagcagtgtcacctttcacctctatgtc
agcacagcaccatgtggagatggagcactctttgataaatcctgcagtgatcaggcaaat
gagatgggacaaccccaacaccagcctctctttgagaactccaaacaaggcaagctgcgg
accaaggtggagaatggtgaaggtaccattcccgtggagtcgagtgacattgtgcccaca
tgggatgggatccagcatggggagcggttacgaaccatgtcctgcagtgacaaaatctta
cgctggaatgtacttggcttgcaaggggcactgctgtcacacttcctagagccagtttat
ctccattctgttacactcggttacttgtacagtcagggtcacttggcccgtgccatctgc
tgccgcgtggacagggatgggagcacactgagggaaaagctccaggctccctatcacatt
aaccatcctgaggttgggcgagtcagcgtgtatgactctgcaaggcagacgggcaagaca
aaggagtcatcggtgaattggtgtcttgctgatgaaagcgaagttgaagtcttggatggc
accaaagggaaagtagatggtctgaagctggaggtgtctcgtgtgtccaagaggaagatg
ttcaccctgttccggcagctctgtgcaaagaacagccgcagagacctgctgagcttctct
gtgtactcagatgccaaggaggcggccacagcgtaccaggcagccaagcagtgcttctac
agcacgctggaagagctgggctatggcagctggatccgcaaaccccaggaggaagaaagt
ttctctgtcctcgatgcgtag
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