Homo sapiens (human): 10189
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Entry
10189 CDS
T01001
Symbol
ALYREF, ALY, ALY/REF, BEF, REF, THOC4
Name
(RefSeq) Aly/REF export factor
KO
K12881
THO complex subunit 4
Organism
hsa
Homo sapiens (human)
Pathway
hsa03013
Nucleocytoplasmic transport
hsa03015
mRNA surveillance pathway
hsa03040
Spliceosome
hsa05014
Amyotrophic lateral sclerosis
hsa05168
Herpes simplex virus 1 infection
Network
nt06464
Amyotrophic lateral sclerosis
Element
N01152
Nuclear export of mRNA
N01153
Mutation-caused aberrant GLE1 to nuclear export of mRNA
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
10189 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
10189 (ALYREF)
03015 mRNA surveillance pathway
10189 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
10189 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
10189 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsa03019
]
10189 (ALYREF)
03041 Spliceosome [BR:
hsa03041
]
10189 (ALYREF)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
10189 (ALYREF)
TREX complex
10189 (ALYREF)
Spliceosome [BR:
hsa03041
]
Complex C
Other components
EJC/TREX
10189 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
10189 (ALYREF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
FYTT
RRM_5
Motif
Other DBs
NCBI-GeneID:
10189
NCBI-ProteinID:
NP_005773
OMIM:
604171
HGNC:
19071
Ensembl:
ENSG00000183684
UniProt:
Q86V81
E9PB61
Structure
PDB
LinkDB
All DBs
Position
17:complement(81887835..81891587)
Genome browser
AA seq
264 aa
AA seq
DB search
MPDSAPAMADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGG
PIRNRPAIARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNL
DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG
RPMNIQLVTSQIDAQRRPAQSVNRGGMTRNRGAGGFGGGGGTRRGTRGGARGRGRGAGRN
SKQQLSAEELDAQLDAYNARMDTS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcccgattccgcgcccgccatggccgacaaaatggacatgtctctggacgacatcatt
aaactgaaccggagccagcgaggcggccggggcgggggccggggccgcggccgggccggc
tcccagggcggccgcggcggtggggcgcaggccgccgcgcgagtgaatcgaggcggcggg
cccatccggaaccggccggccatcgcccgcggcgcggccggcggaggcggcaggaaccga
ccggcgccctacagcaggccaaaacaacttcccgacaagtggcagcacgatcttttcgac
agtggcttcggcggtggtgccggcgtggagacaggtgggaaactgctggtgtccaatctg
gattttggagtctcagacgccgatattcaggaactctttgctgaatttggaacgctgaag
aaggcggctgtgcactatgatcgctctggtcgcagcttaggaacagcagacgtgcacttt
gagcggaaggcagatgccctgaaggccatgaagcagtacaacggcgtccctctggatggc
cgccccatgaacattcagcttgtcacgtcacagattgacgcacagcggaggcctgcacag
agcgtaaacagaggtggcatgactagaaaccgtggcgctggaggttttggtggtggtgga
ggcacccggagaggcacccgcggaggcgcccgtggaagaggcagaggtgccggcaggaat
tcaaagcagcagctttcggcagaggagctggatgcccagctggacgcctataatgcgaga
atggacaccagttaa
DBGET
integrated database retrieval system