Homo sapiens (human): 11340
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Entry
11340 CDS
T01001
Symbol
EXOSC8, CIP3, EAP2, OIP2, PCH1C, RRP43, Rrp43p, bA421P11.3, p9
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
hsa
Homo sapiens (human)
Pathway
hsa03018
RNA degradation
Disease
H00897
Pontocerebellar hypoplasia
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
11340 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsa03019
]
11340 (EXOSC8)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
11340 (EXOSC8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Modigliani
Motif
Other DBs
NCBI-GeneID:
11340
NCBI-ProteinID:
NP_852480
OMIM:
606019
HGNC:
17035
Ensembl:
ENSP00000374354.3
UniProt:
Q96B26
Structure
PDB
PDBj
LinkDB
All DBs
Position
13:37000786..37009614
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AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVIC
GVKAEFAAPSTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQ
KEDLCISPGKLVWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVN
LKKKSYLNIRTHPVATSFAVFDDTLLIVDPTGEEEHLATGTLTIVMDEEGKLCCLHKPGG
SGLTGAKLQDCMSRAVTRHKEVKKLMDEVIKSMKPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgggttcaaaaccgtggaacctctggagtattacaggagatttctgaaagag
aactgccgtcctgatggaagagaacttggtgaattcagaaccacaactgtcaacatcggt
tcaattagtaccgcagatggttctgctttagtgaagttgggaaatactacagtaatctgt
ggagttaaagcagaatttgcagcaccatcaacagatgcccctgataaaggatacgttgtt
cctaatgtggatctaccacccctgtgttcatcgagattccggtctggacctcctggagaa
gaggcccaagtggctagccagttcattgcagatgtcattgaaaattcacagataattcag
aaagaggacttatgcatttctccaggaaagcttgtctgggttctatactgtgatctcatt
tgcctcgactacgatggaaacattttggatgcctgcacatttgctttgctagcggcttta
aaaaatgtacagttgcctgaagttactataaatgaagaaactgctttagcagaagttaat
ttaaagaagaaaagttatttgaatattagaactcatccagttgcaacttcctttgctgtg
tttgatgacactttgcttatagttgaccctactggagaggaggaacatctggcaacagga
accttaacaatagtaatggatgaggaaggcaaactctgttgtcttcacaaaccaggtgga
agtgggctaactggagctaaacttcaggactgtatgagccgagcagttacaagacacaaa
gaagttaaaaaactgatggatgaagtaattaagagtatgaaacccaaataa
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