Homo sapiens (human): 134701
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Entry
134701 CDS
T01001
Symbol
RIPPLY2, C6orf159, SCDO6, dJ237I15.1
Name
(RefSeq) ripply transcriptional repressor 2
Organism
hsa
Homo sapiens (human)
Network
nt06511
NOTCH signaling
Element
N01481
Notch-MESP2 signaling
Disease
H00517
Spondylocostal dysostosis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ripply
Motif
Other DBs
NCBI-GeneID:
134701
NCBI-ProteinID:
NP_001009994
OMIM:
609891
HGNC:
21390
Ensembl:
ENSG00000203877
UniProt:
Q5TAB7
LinkDB
All DBs
Position
6:83853229..83857515
Genome browser
AA seq
128 aa
AA seq
DB search
MENAGGAEGTESGAAACAATDGPTRRAGADSGYAGFWRPWVDAGGKKEEETPNHAAEAMP
DGPGMTAASGKLYQFRHPVRLFWPKSKCYDYLYQEAEALLKNFPIQATISFYEDSDSEDE
IEDLTCEN
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcgggaggcgcagagggtacagagagtggagctgcggcgtgcgcggccacc
gacggccctacgcggcgcgcgggcgcggactccggatacgcaggcttctggagaccctgg
gtggacgccggaggcaagaaagaagaggagacgccgaaccacgccgcggaggcgatgccc
gatggccctggaatgaccgcagcctcaggaaagctttaccaattcaggcacccagtcaga
ctattttggccaaaatcaaaatgttatgattacttatatcaagaagcagaagctcttctg
aaaaattttccaattcaagccacaatttcattttatgaagattctgatagcgaagatgaa
attgaggatctgacctgtgaaaattaa
Homo sapiens (human): 3955
Help
Entry
3955 CDS
T01001
Symbol
LFNG, SCDO3
Name
(RefSeq) LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
hsa
Homo sapiens (human)
Pathway
hsa00514
Other types of O-glycan biosynthesis
hsa04330
Notch signaling pathway
hsa05165
Human papillomavirus infection
Network
nt06511
NOTCH signaling
Element
N01480
Notch-HES7 signaling
N01481
Notch-MESP2 signaling
Disease
H00517
Spondylocostal dysostosis
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
3955 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
3955 (LFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
3955 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hsa01003
]
3955 (LFNG)
Enzymes [BR:
hsa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
3955 (LFNG)
Glycosyltransferases [BR:
hsa01003
]
Glycan extension
O-Glycan
3955 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
3955
NCBI-ProteinID:
NP_001035257
OMIM:
602576
HGNC:
6560
Ensembl:
ENSG00000106003
UniProt:
Q8NES3
LinkDB
All DBs
Position
7:2512529..2529177
Genome browser
AA seq
379 aa
AA seq
DB search
MLKRCGRRLLLALAGALLACLLVLTADPPPPPLPAERGRRALRSLAGPAGAAPAPGLGAA
AAAPGALVRDVHSLSEYFSLLTRARRDAGPPPGAAPRPADGHPRPLAEPLAPRDVFIAVK
TTKKFHRARLDLLLETWISRHKEMTFIFTDGEDEALARHTGNVVITNCSAAHSRQALSCK
MAVEYDRFIESGRKWFCHVDDDNYVNLRALLRLLASYPHTRDVYVGKPSLDRPIQAMERV
SENKVRPVHFWFATGGAGFCISRGLALKMSPWASGGHFMNTAERIRLPDDCTIGYIVEAL
LGVPLIRSGLFHSHLENLQQVPTSELHEQVTLSYGMFENKRNAVHVKGPFSVEADPSRFR
SIHCHLYPDTPWCPRTAIF
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcgctgcggccggcgcctgctgctggcgctggcgggcgcgctgctcgcctgc
ctgctggtgctcaccgccgacccgccgccgcctccactgcccgccgagcgcggccggcgc
gcgctgcgcagcctggcgggccccgcgggggctgccccggcgcccgggctgggggcggcg
gcggcggcgcccggggcgctggtccgcgacgtgcacagtctgtccgagtacttcagcctg
ctcacccgcgcgcgcagagatgcgggcccgccgcccggggctgccccccgccccgccgac
ggccacccgcgccccctggccgagccgctcgcgccccgagacgtcttcatcgctgtcaag
accaccaaaaagttccaccgcgcgcgcctcgacctgctgctggagacctggatctcgcgc
cacaaggagatgacgttcatcttcactgacggggaagatgaggccctggccaggcacacg
ggcaacgtggtcatcacaaactgctcggccgcccacagccgccaggcgctgtcctgcaag
atggccgtggagtatgaccgcttcatcgagtccggcaggaagtggttctgccacgtggac
gatgacaactacgtcaacctgcgggccctgctgcggctgctggccagctacccgcacacg
cgggacgtctacgtcggcaagcccagcctggacaggcccatccaggccatggagcgggtc
agcgagaacaaggtgcgtcctgtccacttctggtttgccacgggcggcgctggcttctgc
atcagccgtgggctggctctgaagatgagcccgtgggccagcgggggtcacttcatgaat
acggctgagcggatccggctgcctgatgactgcaccatcggctacatcgtggaggccctg
ctgggtgtgcccctcatccgcagcggcctcttccactcccacctggagaacctgcagcag
gtgcccacctcggagctccacgagcaggtgacgctgagctacggtatgtttgaaaacaag
cggaacgccgtccacgtgaaggggcccttctcggtggaggccgacccatccaggttccgc
tccatccactgccacctgtacccggacacaccctggtgtccccgcactgccatcttctag
Homo sapiens (human): 2043
Help
Entry
2043 CDS
T01001
Symbol
EPHA4, EK8, HEK8, SEK, TYRO1
Name
(RefSeq) EPH receptor A4
KO
K05105
Eph receptor A4 [EC:
2.7.10.1
]
Organism
hsa
Homo sapiens (human)
Pathway
hsa04360
Axon guidance
Network
nt06511
NOTCH signaling
Element
N01481
Notch-MESP2 signaling
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
2043 (EPHA4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hsa01001
]
2043 (EPHA4)
Enzymes [BR:
hsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
2043 (EPHA4)
Protein kinases [BR:
hsa01001
]
Receptor tyrosine kinases (RTK)
EPH family [OT]
2043 (EPHA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ephrin_lbd
Pkinase
fn3
EphA2_TM
SAM_2
SAM_1
Pur_ac_phosph_N
Ephrin_rec_like
fn3_2
CRLF2-like_D2
ABC1
Haspin_kinase
Kdo
DUF6377
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
2043
NCBI-ProteinID:
NP_001291465
OMIM:
602188
HGNC:
3388
Ensembl:
ENSG00000116106
UniProt:
P54764
Structure
PDB
LinkDB
All DBs
Position
2:complement(221418027..221574202)
Genome browser
AA seq
986 aa
AA seq
DB search
MAGIFYFALFSCLFGICDAVTGSRVYPANEVTLLDSRSVQGELGWIASPLEGGWEEVSIM
DEKNTPIRTYQVCNVMEPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSLPGVMGTCKE
TFNLYYYESDNDKERFIRENQFVKIDTIAADESFTQVDIGDRIMKLNTEIRDVGPLSKKG
FYLAFQDVGACIALVSVRVFYKKCPLTVRNLAQFPDTITGADTSSLVEVRGSCVNNSEEK
DVPKMYCGADGEWLVPIGNCLCNAGHEERSGECQACKIGYYKALSTDATCAKCPPHSYSV
WEGATSCTCDRGFFRADNDAASMPCTRPPSAPLNLISNVNETSVNLEWSSPQNTGGRQDI
SYNVVCKKCGAGDPSKCRPCGSGVHYTPQQNGLKTTKVSITDLLAHTNYTFEIWAVNGVS
KYNPNPDQSVSVTVTTNQAAPSSIALVQAKEVTRYSVALAWLEPDRPNGVILEYEVKYYE
KDQNERSYRIVRTAARNTDIKGLNPLTSYVFHVRARTAAGYGDFSEPLEVTTNTVPSRII
GDGANSTVLLVSVSGSVVLVVILIAAFVISRRRSKYSKAKQEADEEKHLNQGVRTYVDPF
TYEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYT
DKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV
IQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT
TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG
YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKRTGTESSRPNT
ALLDPSSPEFSAVVSVGDWLQAIKMDRYKDNFTAAGYTTLEAVVHVNQEDLARIGITAIT
HQNKILSSVQAMRTQMQQMHGRMVPV
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggctgggattttctatttcgccctattttcgtgtctcttcgggatttgcgacgctgtc
acaggttccagggtataccccgcgaatgaagttaccttattggattccagatctgttcag
ggagaacttgggtggatagcaagccctctggaaggagggtgggaggaagtgagtatcatg
gatgaaaaaaatacaccaatccgaacctaccaagtgtgcaatgtgatggaacccagccag
aataactggctacgaactgattggatcacccgagaaggggctcagagggtgtatattgag
attaaattcaccttgagggactgcaatagtcttccgggcgtcatggggacttgcaaggag
acgtttaacctgtactactatgaatcagacaacgacaaagagcgtttcatcagagagaac
cagtttgtcaaaattgacaccattgctgctgatgagagcttcacccaagtggacattggt
gacagaatcatgaagctgaacaccgagatccgggatgtagggccattaagcaaaaagggg
ttttacctggcttttcaggatgtgggggcctgcatcgccctggtatcagtccgtgtgttc
tataaaaagtgtccactcacagtccgcaatctggcccagtttcctgacaccatcacaggg
gctgatacgtcttccctggtggaagttcgaggctcctgtgtcaacaactcagaagagaaa
gatgtgccaaaaatgtactgtggggcagatggtgaatggctggtacccattggcaactgc
ctatgcaacgctgggcatgaggagcggagcggagaatgccaagcttgcaaaattggatat
tacaaggctctctccacggatgccacctgtgccaagtgcccaccccacagctactctgtc
tgggaaggagccacctcgtgcacctgtgaccgaggctttttcagagctgacaacgatgct
gcctctatgccctgcacccgtccaccatctgctcccctgaacttgatttcaaatgtcaac
gagacatctgtgaacttggaatggagtagccctcagaatacaggtggccgccaggacatt
tcctataatgtggtatgcaagaaatgtggagctggtgaccccagcaagtgccgaccctgt
ggaagtggggtccactacaccccacagcagaatggcttgaagaccaccaaagtctccatc
actgacctcctagctcataccaattacacctttgaaatctgggctgtgaatggagtgtcc
aaatataaccctaacccagaccaatcagtttctgtcactgtgaccaccaaccaagcagca
ccatcatccattgctttggtccaggctaaagaagtcacaagatacagtgtggcactggct
tggctggaaccagatcggcccaatggggtaatcctggaatatgaagtcaagtattatgag
aaggatcagaatgagcgaagctatcgtatagttcggacagctgccaggaacacagatatc
aaaggcctgaaccctctcacttcctatgttttccacgtgcgagccaggacagcagctggc
tatggagacttcagtgagcccttggaggttacaaccaacacagtgccttcccggatcatt
ggagatggggctaactccacagtccttctggtctctgtctcgggcagtgtggtgctggtg
gtaattctcattgcagcttttgtcatcagccggagacggagtaaatacagtaaagccaaa
caagaagcggatgaagagaaacatttgaatcaaggtgtaagaacatatgtggaccccttt
acgtacgaagatcccaaccaagcagtgcgagagtttgccaaagaaattgacgcatcctgc
attaagattgaaaaagttataggagttggtgaatttggtgaggtatgcagtgggcgtctc
aaagtgcctggcaagagagagatctgtgtggctatcaagactctgaaagctggttataca
gacaaacagaggagagacttcctgagtgaggccagcatcatgggacagtttgaccatccg
aacatcattcacttggaaggcgtggtcactaaatgtaaaccagtaatgatcataacagag
tacatggagaatggctccttggatgcattcctcaggaaaaatgatggcagatttacagtc
attcagctggtgggcatgcttcgtggcattgggtctgggatgaagtatttatctgatatg
agctatgtgcatcgtgatctggccgcacggaacatcctggtgaacagcaacttggtctgc
aaagtgtctgattttggcatgtcccgagtgcttgaggatgatccggaagcagcttacacc
accaggggtggcaagattcctatccggtggactgcgccagaagcaattgcctatcgtaaa
ttcacatcagcaagtgatgtatggagctatggaatcgttatgtgggaagtgatgtcgtac
ggggagaggccctattgggatatgtccaatcaagatgtgattaaagccattgaggaaggc
tatcggttaccccctccaatggactgccccattgcgctccaccagctgatgctagactgc
tggcagaaggagaggagcgacaggcctaaatttgggcagattgtcaacatgttggacaaa
ctcatccgcaaccccaacagcttgaagaggacagggacggagagctccagacctaacact
gccttgttggatccaagctcccctgaattctctgctgtggtatcagtgggcgattggctc
caggccattaaaatggaccggtataaggataacttcacagctgctggttataccacacta
gaggctgtggtgcacgtgaaccaggaggacctggcaagaattggtatcacagccatcacg
caccagaataagattttgagcagtgtccaggcaatgcgaacccaaatgcagcagatgcac
ggcagaatggttcccgtctga
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integrated database retrieval system
