Homo sapiens (human): 26160
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Entry
26160 CDS
T01001
Symbol
IFT172, BBS20, NPHP17, RP71, SLB, SRTD10, osm-1, wim
Name
(RefSeq) intraflagellar transport 172
KO
K19676
intraflagellar transport protein 172
Organism
hsa
Homo sapiens (human)
Disease
H00418
Bardet-Biedl syndrome
H00527
Retinitis pigmentosa
H02157
Short-rib thoracic dysplasia
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsa03037
]
26160 (IFT172)
Cilium and associated proteins [BR:
hsa03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
26160 (IFT172)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
TPR_GEMI5
WD40_CDC20-Fz
TPR_ELP1
WD40_WDHD1_1st
TPR_IFT80_172
WD40
Clathrin
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_Prp19
WDR55
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_IFT80_2nd
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
RPN7
Beta-prop_Vps41
HAT_PRP39_C
TPR_COPA_B
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
26160
NCBI-ProteinID:
NP_056477
OMIM:
607386
HGNC:
30391
Ensembl:
ENSG00000138002
UniProt:
Q9UG01
Structure
PDB
PDBj
LinkDB
All DBs
Position
2:complement(27444377..27489743)
Genome browser
AA seq
1749 aa
AA seq
DB search
MHLKHLRTLLSPQDGAAKVTCMAWSQNNAKFAVCTVDRVVLLYDEHGERRDKFSTKPADM
KYGRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQW
PAEYIIVFGLAEGKVRLANTKTNKSSTIYGTESYVVSLTTNCSGKGILSGHADGTIVRYF
FDDEGSGESQGKLVNHPCPPYALAWATNSIVAAGCDRKIVAYGKEGHMLQTFDYSRDPQE
REFTTAVSSPGGQSVVLGSYDRLRVFNWIPRRSIWEEAKPKEITNLYTITALAWKRDGSR
LCVGTLCGGVEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSSGTRVVLKSHYGYEVEEV
KILGKERYLVAHTSETLLLGDLNTNRLSEIAWQGSGGNEKYFFENENVCMIFNAGELTLV
EYGNNDTLGSVRTEFMNPHLISVRINERCQRGTEDNKKLAYLIDIKTIAIVDLIGGYNIG
TVSHESRVDWLELNETGHKLLFRDRKLRLHLYDIESCSKTMILNFCSYMQWVPGSDVLVA
QNRNSLCVWYNIEAPERVTMFTIRGDVIGLERGGGKTEVMVMEGVTTVAYTLDEGLIEFG
TAIDDGNYIRATAFLETLEMTPETEAMWKTLSKLALEARQLHIAERCFSALGQVAKARFL
HETNEIADQVSREYGGEGTDFYQVRARLAMLEKNYKLAEMIFLEQNAVEEAMGMYQELHR
WDECIAVAEAKGHPALEKLRRSYYQWLMDTQQEERAGELQESQGDGLAAISLYLKAGLPA
KAARLVLTREELLANTELVEHITAALIKGELYERAGDLFEKIHNPQKALECYRKGNAFMK
AVELARLAFPVEVVKLEEAWGDHLVQQKQLDAAINHYIEARCSIKAIEAALGARQWKKAI
YILDLQDRNTASKYYPLVAQHYASLQEYEIAEELYTKGDRTKDAIDMYTQAGRWEQAHKL
AMKCMRPEDVSVLYITQAQEMEKQGKYREAERLYVTVQEPDLAITMYKKHKLYDDMIRLV
GKHHPDLLSDTHLHLGKELEAEGRLQEAEYHYLEAQEWKATVNMYRASGLWEEAYRVART
QGGANAHKHVAYLWAKSLGGEAAVRLLNKLGLLEAAVDHAADNCSFEFAFELSRLALKHK
TPEVHLKYAMFLEDEGKFEEAEAEFIRAGKPKEAVLMFVHNQDWEAAQRVAEAHDPDSVA
EVLVGQARGALEEKDFQKAEGLLLRAQRPGLALNYYKEAGLWSDALRICKDYVPSQLEAL
QEEYEREATKKGARGVEGFVEQARHWEQAGEYSRAVDCYLKVRDSGNSGLAEKCWMKAAE
LSIKFLPPQRNMEVVLAVGPQLIGIGKHSAAAELYLNLDLVKEAIDAFIEGEEWNKAKRV
AKELDPRYEDYVDQHYKEFLKNQGKVDSLVGVDVIAALDLYVEQGQWDKCIETATKQNYK
ILHKYVALYATHLIREGSSAQALALYVQHGAPANPQNFNIYKRIFTDMVSSPGTNCAEAY
HSWADLRDVLFNLCENLVKSSEANSPAHEEFKTMLLIAHYYATRSAAQSVKQLETVAARL
SVSLLRHTQLLPVDKAFYEAGIAAKAVGWDNMAFIFLNRFLDLTDAIEEGTLDGLDHSDF
QDTDIPFEVPLPAKQHVPEAEREEVRDWVLTVSMDQRLEQVLPRDERGAYEASLVAASTG
VRALPCLITGYPILRNKIEFKRPGKAANKDNWNKFLMAIKTSHSPVCQDVLKFISQWCGG
LPSTSFSFQ
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgaagcacctgaggaccctgctgagccctcaggatggagctgcaaaggtgacc
tgcatggcttggtcccagaacaatgccaaatttgctgtctgcacagtggaccgagtggtc
ttgctgtatgatgaacatggagaacggagagataaattctccaccaaaccagctgacatg
aagtatggcaggaagagctatatggtgaagggcatggctttttctcctgattccactaaa
attgccataggacagactgacaacatcatctatgtctacaagattggagaagattggggt
gacaagaaagtcatctgcaacaagttcatccagacgagtgctgtcacttgtctgcaatgg
ccggcagaatacatcattgtctttggactggctgaagggaaggttcgtttagcaaacacc
aaaactaataaatcatctaccatctatgggacagagtcttacgtggtgtccctgacaaca
aattgctctgggaaaggaattctctctggtcatgcagatggtaccatcgttaggtatttc
tttgatgatgaaggctctggagagtcacaggggaagttggttaaccacccgtgtccaccc
tatgccttggcatgggcaaccaatagcatcgtggctgcaggctgtgatcggaaaattgta
gcctatggaaaagaaggtcacatgctacaaacttttgattatagccgtgaccctcaggag
cgggagttcaccacagctgtatcaagtcctgggggccagtctgttgtgctaggaagttat
gacaggcttcgggtgttcaactggatccctcgaagaagcatctgggaagaggcaaagccc
aaggagattaccaatttatacaccatcactgccttggcctggaagcgggatggctcacgg
ctctgtgtgggcacactatgtggtggggtggaacagtttgactgctgcctccgaaggagt
atttacaagaacaagtttgagttgacgtatgtgggacctagccaggtgattgtgaagaac
ctgtcatcaggaacccgagtggtgctcaagtcacactatggctatgaggtggaagaggtg
aaaatcctaggaaaggaacgttacttggtggctcacacatcagaaacactgctgctgggg
gacctgaacactaatcggcttagtgagatagcctggcaaggatctggtggcaatgagaag
tatttctttgaaaatgagaatgtatgcatgatcttcaatgccggagagctaaccctggtg
gaatatgggaataatgacaccctgggttctgtacgcactgaattcatgaacccccacctc
atcagtgttcgtattaatgagaggtgtcagcgaggaacagaagataataagaaattggct
tatcttattgatattaagactattgctatagtggatctgattggtggctacaacattggc
accgtcagccatgagagccgtgtggattggctggaacttaatgagactggacacaagctc
ctcttcagggaccggaaacttcgtttgcatctgtatgatattgaaagctgctctaagaca
atgatcctcaacttctgctcctatatgcagtgggtcccaggaagtgacgtgctggtagct
cagaaccgaaacagtctgtgtgtatggtacaacattgaggcacctgagagagtcaccatg
ttcactattaggggtgatgttataggtctggagcggggcgggggaaagaccgaggtgatg
gtgatggaaggtgtgactactgttgcctacacattggatgagggcctcatcgagtttgga
acagccattgatgatggcaactacatccgggcaacagccttcttagagactctggaaatg
accccagaaacagaggcaatgtggaaaaccttgagtaaactggcactagaggcaaggcaa
ctacacattgcggagaggtgcttttctgctttgggccaagtagcaaaagctcgattcctg
catgagaccaatgagattgcagatcaagtatcccgggaatatggcggagaaggaacagac
ttttatcaggtccgagcacgtctagccatgctggaaaagaactacaaactggctgaaatg
atctttttggaacagaatgctgtggaggaggccatgggcatgtaccaggagctacaccgt
tgggatgagtgtatcgctgtggctgaagccaaggggcacccagccctggagaagctacgt
cgtagttactaccagtggctgatggacacacagcaagaggagcgagcaggtgaactacag
gagagccaaggggatgggctagcagccatcagcctctacctcaaagctgggctccctgcc
aaagctgctcggctggtgctgacccgagaggaactgctagccaacacagagctggtagaa
cacatcactgcagcccttatcaagggggaactctacgaaagggcaggtgatctctttgag
aagattcacaatccacagaaggccctggagtgctaccgtaaaggcaacgcattcatgaaa
gcggtagagctggctcgattggccttcccagtggaggtggtgaaactagaggaggcatgg
ggggaccacctggtgcagcagaagcagcttgatgcagccattaatcactacatcgaagcc
aggtgctccattaaggcaattgaggccgccctgggtgcccgccagtggaagaaggcaatt
tatatattagatctacaggaccggaacactgcatccaaatactatcctctcgtggcccaa
cactatgcatccctgcaggagtatgagattgctgaggagctctatactaagggagatcgg
acaaaagatgccatagacatgtacacccaggctggtcgttgggaacaagcccacaagctg
gcgatgaaatgcatgagaccagaagatgtgtcagtgctatacatcactcaggcccaggaa
atggagaagcagggcaagtaccgtgaggctgaaaggctatatgtgacagtacaagagcct
gatcttgccatcaccatgtacaaaaagcacaagttgtatgatgacatgatccgcctggta
gggaagcaccatccagatctcctcagtgatacacacctacatctgggcaaggagctggag
gctgaaggccgactacaggaggctgagtaccactacctcgaggcccaggaatggaaggca
acagtgaacatgtaccgggccagtgggctttgggaagaggcctacagggtggccagaact
caaggaggggctaatgcccacaaacacgtggcctatctgtgggcaaagagcctgggagga
gaggctgcagttagactgcttaataagctgggactcctggaagctgctgttgaccacgct
gcagacaattgctcctttgaatttgcgtttgaactctctcggctggccctcaagcacaaa
acccccgaggttcatctcaaatatgctatgttcctggaggatgagggtaaattcgaagag
gctgaagctgaattcatcagagctggtaaacccaaggaggcagtcctcatgtttgtccat
aaccaggattgggaggcagctcagcgtgtggctgaggctcacgaccctgacagtgtcgcc
gaggtgcttgtgggacaggcccggggggccttggaggagaaggactttcagaaagcagaa
gggctgctgctccgggcccagagaccaggcctggccctcaattattataaggaggctgga
ttatggagtgacgctctgcgcatctgcaaggactatgtgcccagccagctggaggctctg
caggaagaatatgagcgggaagctactaagaagggggccaggggtgtggagggatttgtg
gaacaagctcgacactgggagcaggctggagagtacagccgtgccgtggactgctacctc
aaagtgcgagactctggaaacagcggcctggcggagaagtgctggatgaaggcagctgaa
ctctccatcaagtttctgcctccccaacgtaatatggaagtcgttctggctgtaggaccc
cagctgattggaattggaaagcacagtgcagctgcagagctctatctgaatctggacctt
gtcaaggaagcaatcgatgctttcatcgagggtgaggagtggaacaaggcgaagcgtgta
gctaaggagttagatcccaggtatgaagactatgtggaccagcattataaagagttcctc
aagaatcagggcaaagtggactcgctggtgggtgtggatgtgatagctgctttggacctg
tatgtggagcagggccagtgggacaagtgcattgaaacagctaccaagcagaactacaag
attctgcacaagtatgtggctttgtatgcaactcacttgatccgggagggtagctctgcc
caggcattggccctgtatgtacagcacggagcccctgctaacccacagaacttcaatatc
tacaaaaggatcttcactgacatggtgagctctcctggaaccaactgtgccgaggcctat
catagctgggctgatcttcgagatgtcctcttcaacctgtgtgaaaacctggtgaagtcc
agtgaggcaaactctccagcccatgaggagttcaagacgatgctgctgatcgctcattac
tatgccacgcgctctgcagcccagagtgtcaaacagctggaaaccgtggctgccaggctt
tctgtttcactcttgcgtcacacccagctactacctgtagacaaagccttctatgaagca
ggcattgctgccaaggcagttggctgggataacatggcattcatcttcctcaatcgcttt
ttggacctgaccgatgcaatcgaggaagggactctagatggccttgaccactctgatttt
caggatacagacattccctttgaggtgccactcccagctaagcagcatgtaccggaggct
gagagagaagaggttcgagactgggtgcttacagtctccatggaccagcggctggagcag
gttctgcctcgggatgagcgtggcgcctacgaggcctccctagtggcagcgagcactggt
gttcgagccctgccctgccttattacaggataccccattctgaggaacaaaattgaattt
aagcggccagggaaggctgctaacaaggacaactggaataaattccttatggccatcaag
acctcccacagcccagtgtgccaggacgtgctgaaattcatcagtcagtggtgtggaggg
ctccccagcaccagcttttcctttcagtag
DBGET
integrated database retrieval system
