Entry |
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Symbol |
LSM3, SMX4, USS2, YLR438C
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Name |
(RefSeq) LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
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KO |
K12622 | U6 snRNA-associated Sm-like protein LSm3 |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:hsa00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
27258 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
27258 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:hsa03019]
27258 (LSM3)
03041 Spliceosome [BR:hsa03041]
27258 (LSM3)
Messenger RNA biogenesis [BR:hsa03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
27258 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
27258 (LSM3)
Spliceosome [BR:hsa03041]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
27258 (LSM3)
Complex C
U2 snRNP components
27258 (LSM3)
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SSDB |
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Motif |
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Other DBs |
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Structure |
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LinkDB |
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Position |
3:14178817..14201122
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AA seq |
102 aa
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG |
NT seq |
309 nt +upstreamnt +downstreamnt
atggcggacgacgtagaccagcaacaaactaccaacactgtagaggagcccctggatctt
atcaggctcagcctagatgagcgaatttatgtgaaaatgagaaatgaccgagagcttcga
ggcagattacatgcttatgatcaacatttaaatatgatcttgggagatgtggaagaaact
gtgactactatagaaattgatgaagaaacatatgaagagatatataaatcaacgaaacgg
aatattccaatgctctttgtccggggagatggcgttgtcctggttgcccctccactgaga
gttggctga |