Homo sapiens (human): 27339
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Entry
27339 CDS
T01001
Symbol
PRPF19, NMP200, PRP19, PSO4, SNEV, UBOX4, hPSO4
Name
(RefSeq) pre-mRNA processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
hsa
Homo sapiens (human)
Pathway
hsa03040
Spliceosome
hsa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
27339 (PRPF19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
27339 (PRPF19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsa03041
]
27339 (PRPF19)
04121 Ubiquitin system [BR:
hsa04121
]
27339 (PRPF19)
03400 DNA repair and recombination proteins [BR:
hsa03400
]
27339 (PRPF19)
Enzymes [BR:
hsa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
27339 (PRPF19)
Spliceosome [BR:
hsa03041
]
Complex B
Other components
Prp19 complex
27339 (PRPF19)
Complex C
Prp19-CDC5 complex
27339 (PRPF19)
Ubiquitin system [BR:
hsa04121
]
Ubiquitin ligases (E3)
U-box type E3
27339 (PRPF19)
DNA repair and recombination proteins [BR:
hsa03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
27339 (PRPF19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
U-box
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_SPT8
PROPPIN
Beta-prop_Nup120_160
eIF2A
Cytochrom_D1
RMC1_N
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
zf-Nse
Beta-prop_LRRK2
DUF1830
ATG16
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
27339
NCBI-ProteinID:
NP_055317
OMIM:
608330
HGNC:
17896
Ensembl:
ENSG00000110107
UniProt:
Q9UMS4
Structure
PDB
PDBj
LinkDB
All DBs
Position
11:complement(60890547..60906585)
Genome browser
AA seq
504 aa
AA seq
DB search
MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP
IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA
TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG
GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQ
VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP
DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD
LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG
VAFGHHAKFIASTGMDRSLKFYSL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtccctaatctgctccatctctaacgaagtgccggagcacccatgtgtatcccctgtc
tctaatcatgtttatgagcggcggctcatcgagaagtacattgcggagaatggtaccgac
cccatcaacaaccagcctctctccgaggagcagctcatcgacatcaaagttgctcaccca
atccggcccaagcctccctcagccaccagcatcccggccattctgaaagctttgcaggat
gagtgggatgcagtcatgctgcacagcttcactctgcgccagcagctgcagacaacccgc
caagagctgtcacacgctctgtaccagcacgatgccgcctgccgtgtcattgcccgtctc
accaaggaagtcactgctgcccgagaagctctggctaccctgaaaccacaggctggcctc
attgtgccccaggctgtgccaagttcccaaccaagtgttgtgggtgcgggtgagccaatg
gatttgggtgagctggtgggaatgaccccagagattattcagaagcttcaagacaaagcc
actgtgctaaccacggagcgcaagaagagagggaagactgtgcctgaggagctggtgaag
ccagaagagctcagcaaataccggcaggtggcatcccacgtggggttgcacagtgccagc
attcctgggatcctggccctggacctctgcccgtccgacaccaacaagatcctcactggt
ggggcggataaaaatgtcgttgtgtttgacaaaagttctgaacaaatcctggctaccctc
aaaggccataccaagaaggtcaccagcgtggtgtttcacccttcccaggacctggtgttt
tctgcttcccccgatgccactatcaggatttggtcggtccccaatgcctcttgtgtacag
gtggttcgggcccatgagagtgctgtgacaggcctcagccttcatgccactggcgactat
ctcctgagctcctccgatgatcagtactgggctttctctgacatccagacagggcgtgtg
ctcaccaaggtgacagatgagacctccggctgctctctcacctgtgcacagttccaccct
gacggactcatctttggaacaggaaccatggactctcagatcaagatctgggacttgaag
gaacgtactaatgtggccaacttccctggccactcgggccccatcactagcatcgccttc
tctgagaatggttactacctggctacagcggctgatgactcctctgtcaagctctgggat
ctgcgcaagcttaagaactttaagactttgcagctggataacaactttgaggtaaagtca
ctgatctttgaccagagtggtacctacctggctcttgggggcacggatgtccagatctac
atctgcaaacaatggacggagattcttcactttacagagcatagcggcctgaccacaggg
gtggccttcgggcatcacgccaagttcatcgcttcaacaggcatggacagaagcctcaag
ttctacagcctgtag
DBGET
integrated database retrieval system
