KEGG   Homo sapiens (human): 27339
Entry
27339             CDS       T01001                                 
Symbol
PRPF19, NMP200, PRP19, PSO4, SNEV, UBOX4, hPSO4
Name
(RefSeq) pre-mRNA processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
hsa04120  Ubiquitin mediated proteolysis
Network
nt06547  Spliceosome
  Element
N01971  spliceosome activation
N01972  Spliceosome catalysis (branching)
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    27339 (PRPF19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    27339 (PRPF19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    27339 (PRPF19)
   04121 Ubiquitin system [BR:hsa04121]
    27339 (PRPF19)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    27339 (PRPF19)
Enzymes [BR:hsa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     27339 (PRPF19)
Spliceosome [BR:hsa03041]
 Complex B
  Other components
   Prp19 complex
    27339 (PRPF19)
 Complex C
   Prp19-CDC5 complex
    27339 (PRPF19)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  U-box type E3
   27339 (PRPF19)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    27339 (PRPF19)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_WDHD1_1st Prp19 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR41 Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_IFT122_1st U-box Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_SPT8 PROPPIN Beta-prop_Nup120_160 Beta-prop_ACSF4 eIF2A Cytochrom_D1 RMC1_N Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_WDR35_TULP_N zf-Nse DUF1830 ATG16 Cep57_MT_bd
Other DBs
NCBI-GeneID: 27339
NCBI-ProteinID: NP_055317
OMIM: 608330
HGNC: 17896
Ensembl: ENSG00000110107
UniProt: Q9UMS4
Structure
LinkDB
Position
11:complement(60890547..60906585)
AA seq 504 aa
MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP
IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA
TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG
GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQ
VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP
DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD
LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG
VAFGHHAKFIASTGMDRSLKFYSL
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgtccctaatctgctccatctctaacgaagtgccggagcacccatgtgtatcccctgtc
tctaatcatgtttatgagcggcggctcatcgagaagtacattgcggagaatggtaccgac
cccatcaacaaccagcctctctccgaggagcagctcatcgacatcaaagttgctcaccca
atccggcccaagcctccctcagccaccagcatcccggccattctgaaagctttgcaggat
gagtgggatgcagtcatgctgcacagcttcactctgcgccagcagctgcagacaacccgc
caagagctgtcacacgctctgtaccagcacgatgccgcctgccgtgtcattgcccgtctc
accaaggaagtcactgctgcccgagaagctctggctaccctgaaaccacaggctggcctc
attgtgccccaggctgtgccaagttcccaaccaagtgttgtgggtgcgggtgagccaatg
gatttgggtgagctggtgggaatgaccccagagattattcagaagcttcaagacaaagcc
actgtgctaaccacggagcgcaagaagagagggaagactgtgcctgaggagctggtgaag
ccagaagagctcagcaaataccggcaggtggcatcccacgtggggttgcacagtgccagc
attcctgggatcctggccctggacctctgcccgtccgacaccaacaagatcctcactggt
ggggcggataaaaatgtcgttgtgtttgacaaaagttctgaacaaatcctggctaccctc
aaaggccataccaagaaggtcaccagcgtggtgtttcacccttcccaggacctggtgttt
tctgcttcccccgatgccactatcaggatttggtcggtccccaatgcctcttgtgtacag
gtggttcgggcccatgagagtgctgtgacaggcctcagccttcatgccactggcgactat
ctcctgagctcctccgatgatcagtactgggctttctctgacatccagacagggcgtgtg
ctcaccaaggtgacagatgagacctccggctgctctctcacctgtgcacagttccaccct
gacggactcatctttggaacaggaaccatggactctcagatcaagatctgggacttgaag
gaacgtactaatgtggccaacttccctggccactcgggccccatcactagcatcgccttc
tctgagaatggttactacctggctacagcggctgatgactcctctgtcaagctctgggat
ctgcgcaagcttaagaactttaagactttgcagctggataacaactttgaggtaaagtca
ctgatctttgaccagagtggtacctacctggctcttgggggcacggatgtccagatctac
atctgcaaacaatggacggagattcttcactttacagagcatagcggcctgaccacaggg
gtggccttcgggcatcacgccaagttcatcgcttcaacaggcatggacagaagcctcaag
ttctacagcctgtag

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