KEGG   Homo sapiens (human): 27342
Entry
27342             CDS       T01001                                 
Symbol
RABGEF1, RABEX5, RAP1, rabex-5
Name
(RefSeq) RAB guanine nucleotide exchange factor 1
  KO
K20131  Rab5 GDP/GTP exchange factor
Organism
hsa  Homo sapiens (human)
Pathway
hsa04137  Mitophagy - animal
Network
nt06181  Salmonella
nt06536  Mitophagy
  Element
N01302  Early endosomal fusion
N01760  Endosomal Rab cycles
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    27342 (RABGEF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    27342 (RABGEF1)
Membrane trafficking [BR:hsa04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    27342 (RABGEF1)
 Protein recycling
   Other Rab GTPase associated proteins
    27342 (RABGEF1)
SSDB
Motif
Pfam: VPS9 DUF5601 zf-A20 SSTK-IP
Other DBs
NCBI-GeneID: 27342
NCBI-ProteinID: NP_001273991
OMIM: 609700
HGNC: 17676
Ensembl: ENSG00000154710
UniProt: Q9UJ41 A8K3R3 B3KMF1
Structure
LinkDB
Position
7:66654567..66811464
AA seq 491 aa
MSLKSERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGSKKEIQEA
KAPSPSINRQTSIETDRVSKEFIEFLKTFHKTGQEIYKQTKLFLEGMHYKRDLSIEEQSE
CAQDFYHNVAERMQTRGKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQK
RIRALRWVTPQMLCVPVNEDIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFN
AIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLC
CAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQEAESWSPDACLGVKQMYKNLDLLSQL
NERQERIMNEAKKLEKDLIDWTDGIAREVQDIVEKYPLEIKPPNQPLAAIDSENVENDKL
PPPLQPQVYAG
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgagccttaagtctgaacgccgaggaattcatgtggatcaatcggatctcctgtgcaag
aaaggatgtggttactacggcaaccctgcctggcagggtttctgctccaagtgctggagg
gaagagtaccacaaagccaggcagaagcagattcaggaggactgggagctggcggagcga
ctccagcgggaggaagaagaggcctttgccagcagtcagagcagccaaggggcccaatcc
ctcacattctccaagtttgaagaaaagaaaaccaacgagaagacccgcaaggttaccaca
gtgaagaaattcttcagtgcatcttccagggtcggatcaaagaaggaaattcaggaagca
aaagctcccagtccttccataaaccggcaaaccagcattgaaacggatagagtgtctaag
gagttcatagaatttctcaagaccttccacaagacaggccaagaaatctataaacagacc
aagctgtttttggaaggaatgcattacaaaagggatctaagcattgaagaacagtcagag
tgtgctcaggatttctaccacaatgtggccgaaaggatgcaaactcgtgggaaagtgcct
ccagaaagagtcgagaagataatggatcagattgaaaagtacatcatgactcgtctctat
aaatatgtattctgtccagaaactactgatgatgagaagaaagatcttgccattcaaaag
agaatcagagccctgcgctgggttacgcctcagatgctgtgtgtccctgttaatgaagac
atcccagaagtgtctgatatggtggtgaaggcgatcacagatatcattgaaatggattcc
aagcgtgtgcctcgagacaagctggcctgcatcaccaagtgcagcaagcacatcttcaat
gccatcaagatcaccaagaatgagccggcgtcagcggatgacttcctccccaccctcatc
tacattgttttgaagggcaaccccccacgccttcagtctaatatccagtatatcacgcgc
ttctgcaatccaagccgactgatgactggagaggatggctactatttcaccaatctgtgc
tgtgctgtggctttcattgagaagctagacgcccagtctttgaatctaagtcaggaggat
tttgatcgctacatgtctggccagacctctcccaggaagcaagaagctgagagttggtct
cctgatgcttgcttaggcgtcaagcaaatgtataagaacttggatctcttgtctcagttg
aatgaacgacaagaaaggatcatgaatgaagccaagaaactggaaaaagacctcatagat
tggacagatggaattgcaagagaagttcaagacatcgttgagaaatacccactggaaatt
aagcctccgaatcaaccgttagcagctattgactctgaaaacgttgaaaatgataaactt
cctccaccactgcaacctcaagtttatgcaggatga

KEGG   Homo sapiens (human): 9135
Entry
9135              CDS       T01001                                 
Symbol
RABEP1, RAB5EP, RABPT5
Name
(RefSeq) rabaptin, RAB GTPase binding effector protein 1
  KO
K12480  Rab GTPase-binding effector protein 1
Organism
hsa  Homo sapiens (human)
Pathway
hsa04144  Endocytosis
Network
nt06181  Salmonella
  Element
N01302  Early endosomal fusion
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    9135 (RABEP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    9135 (RABEP1)
Membrane trafficking [BR:hsa04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    9135 (RABEP1)
 Protein recycling
   Rab4 associated proteins
    9135 (RABEP1)
SSDB
Motif
Pfam: Rabaptin Rab5-bind Fez1 Cep57_MT_bd
Other DBs
NCBI-GeneID: 9135
NCBI-ProteinID: NP_004694
OMIM: 603616
HGNC: 17677
Ensembl: ENSG00000029725
UniProt: Q15276
Structure
LinkDB
Position
17:5282284..5386340
AA seq 862 aa
MAQPGPASQPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQ
NAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAV
MKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENLENEMKKAQED
AEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAV
LNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQR
MEIVLTSEQLRQVEELKKKDQEDDEQQRLNKRKDHKKADVEEEIKIPVVCALTQEESSAQ
LSNEEEHLDSTRGSVHSLDAGLLLPSGDPFSKSDNDMFKDGLRRAQSTDSLGTSGSLQSK
ALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFMLTKDQERAIKAMT
PEQEETASLLSSVTQGMESAYVSPSGYRLVSETEWNLLQKEVHNAGNKLGRRCDMCSNYE
KQLQGIQIQEAETRDQVKKLQLMLRQANDQLEKTMKDKQELEDFIKQSSEDSSHQISALV
LRAQASEILLEELQQGLSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHV
SLQQAEDFILPDTTEALRELVLKYREDIINVRTAADHVEEKLKAEILFLKEQIQAEQCLK
ENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKISLE
EQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADS
LERIRAILNDTKLTDINQLPET
NT seq 2589 nt   +upstreamnt  +downstreamnt
atggcgcagccgggcccggcttcccagcctgacgtttctcttcagcaacgggtagcagaa
ttggaaaaaattaatgcagaatttttacgtgcacaacagcagcttgaacaagaatttaat
caaaagagagcaaaatttaaggagttatatttggctaaagaggaggatctgaagaggcaa
aatgcagtattacaagctgcacaagatgatttgggacaccttcgaacccagctgtgggaa
gctcaagcagagatggagaatattaaggcgattgccacagtctctgagaacaccaagcaa
gaagctatagatgaagtgaaaagacagtggagagaagaagttgcttcacttcaggctgtt
atgaaagaaacagttcgtgactatgagcaccagttccaccttaggctggagcaggagcga
acacagtgggcacagtatagagaatccgcagagagggaaatagctgatttaagaagaagg
ctgtctgaaggtcaagaggaggaaaatttagaaaatgaaatgaaaaaggcccaagaggat
gctgagaaacttcggtccgttgtgatgccaatggaaaaggaaattgcagctttgaaggat
aaactgacagaggctgaagacaaaattaaagagctggaggcctcaaaggttaaagaactg
aatcattatctggaagctgagaaatcttgtaggactgatctagagatgtatgtagctgtt
ttgaatactcagaaatctgttctacaggaagatgctgagaaactgcggaaagaattgcat
gaagtttgccatctcttggagcaagagcgacaacaacacaaccagttaaaacatacgtgg
cagaaggccaatgaccagtttctggaatctcagcgtttactgatgagagacatgcagcga
atggagattgtgctaacttcagaacagctccgacaagttgaagaactgaagaagaaagat
caggaggatgatgaacaacaaagactcaataagagaaaggatcacaaaaaagcagatgtt
gaggaagaaataaaaataccagtagtgtgtgctttaactcaagaagaatcttcagcccag
ttatcaaatgaagaggagcatttagacagcacccgtggctcagttcattccttagatgca
ggcttgctgttgccatctggagatcctttcagtaaatcggacaatgacatgtttaaagat
ggactcaggagagcacagtctacagacagcttgggaacctcgggctcattgcaatccaaa
gctttaggctataactacaaagcaaaatctgctggaaacctggacgagtcagattttgga
ccactggtaggagcagattcagtgtctgagaactttgatactgcatcccttgggtcactc
cagatgccaagtgggtttatgttaaccaaagatcaggaaagagcaatcaaggcgatgaca
ccagaacaagaagagacagcgtccctcctctccagcgttacccagggcatggagagtgcc
tatgtgtcccctagtggttatcgtttagttagtgaaacagaatggaatctcttgcagaaa
gaggtacataatgctggaaataaacttggtagacgttgtgatatgtgttccaattacgaa
aaacagttacaaggaattcagattcaggaggctgaaacgagagaccaggtgaaaaaacta
cagctgatgctaaggcaagctaatgaccagttagagaagacaatgaaagataagcaggag
ctggaagacttcataaagcaaagcagcgaagattcgagtcaccagatctctgcactcgtc
ctaagagcccaggcctccgagatcttacttgaagagttacagcaggggctttcccaggca
aagagggatgttcaggaacagatggcggtgctgatgcagtcacgggaacaggtttcagaa
gagctggtgaggttacagaaagataatgacagtctccagggaaagcacagcctgcatgtg
tcattacagcaagcagaagacttcatcctcccagacactacagaggcactgcgggagttg
gtattaaaataccgtgaggacatcattaatgtgcggacagcagcagaccacgtagaagaa
aagctgaaggctgagatacttttcctaaaagagcagatccaagcagaacagtgtttaaaa
gaaaatcttgaagaaactctgcaactagaaatagaaaactgcaaggaggaaatagcttct
atttctagcctaaaagctgaattagaaagaataaaagtggaaaaaggacagttggagtcc
acattaagagagaagtctcaacagcttgagagtcttcaggaaataaagatcagtttggaa
gagcagttaaagaaagagactgctgctaaggctaccgttgaacaactaatgtttgaagag
aagaataaagctcagagattacagacagaattagatgtcagtgagcaagtccagagggat
tttgtaaagctttcacagacccttcaggtgcagttagagcggatccggcaagctgactcc
ttggagagaatccgggcaattctgaatgatactaaactgacagacattaaccagcttcct
gagacatga

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