KEGG   Homo sapiens (human): 4066
Entry
4066              CDS       T01001                                 
Symbol
LYL1, bHLHa18
Name
(RefSeq) LYL1 basic helix-loop-helix family member
  KO
K15604  protein lyl-1
Organism
hsa  Homo sapiens (human)
Pathway
hsa05202  Transcriptional misregulation in cancer
Network
nt06240  Transcription
  Element
N00121  LMO2-rearrangement to transcriptional activation
N00122  LMO2-rearrangement to transcriptional repression
Disease
H00002  T-cell acute lymphoblastic leukemia
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    4066 (LYL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    4066 (LYL1)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Tal/Twist/Atonal/Hen, Lymphoid factors
    4066 (LYL1)
SSDB
Motif
Pfam: HLH
Other DBs
NCBI-GeneID: 4066
NCBI-ProteinID: NP_005574
OMIM: 151440
HGNC: 6734
Ensembl: ENSG00000104903
Vega: OTTHUMG00000180736
Pharos: P12980(Tbio)
UniProt: P12980
LinkDB
Position
19:complement(13099033..13102858)
AA seq 280 aa
MCPPQAQAEVGPTMTEKAEMVCAPSPAPAPPPKPASPGPPQVEEVGHRGGSSPPRLPPGV
PVISLGHSRPPGVAMPTTELGTLRPPLLQLSTLGTAPPTLALHYHPHPFLNSVYIGPAGP
FSIFPSSRLKRRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTH
PPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSG
RRAEAAARSQPAPPADPDGSPGGAARPIKMEQTALSPEVR
NT seq 843 nt   +upstreamnt  +downstreamnt
atgtgcccgcctcaggcacaggcagaggtgggccccaccatgactgagaaggcagagatg
gtgtgtgcccccagcccagcgcctgccccaccccctaagcctgcctcgcctgggcccccg
caggtggaggaggtgggccaccgaggaggctcctcgccccccaggctgccacctggtgta
ccagtgatcagcctgggccacagcaggcccccaggggtagccatgcccaccacagagctg
ggcactctgcggcccccgctgctgcaactctccaccctgggaactgccccgcccactttg
gccctgcactaccaccctcaccccttcctcaacagtgtctacattgggccagcaggacct
tttagcatcttccctagcagccggttgaagcggagaccaagccactgtgagctggacctg
gctgaggggcaccagccccagaaggtggcccggcgcgtgttcaccaacagccgggagcgc
tggcggcagcagaacgttaacggcgccttcgccgagctgaggaagctgctgccgacgcac
ccgcccgaccggaagctgagcaagaacgaggtgctccgcctagccatgaagtacatcggc
ttcctggtgcggctgctgcgcgaccaagccgcagctctggccgcaggccccacccctccc
gggcctcgcaaacggccggtgcaccgggtcccagacgacggcgcccgccggggatccgga
cgcagggccgaggcggcagcgcgctcgcagcccgcgcccccggccgaccccgacggcagc
cccggtggagcggcccggcccatcaagatggagcaaaccgctttgagcccagaggtgcgg
tga

KEGG   Homo sapiens (human): 6929
Entry
6929              CDS       T01001                                 
Symbol
TCF3, AGM8, E2A, E47, ITF1, TCF-3, VDIR, bHLHb21, p75
Name
(RefSeq) transcription factor 3
  KO
K09063  transcription factor E2-alpha
Organism
hsa  Homo sapiens (human)
Pathway
hsa04550  Signaling pathways regulating pluripotency of stem cells
hsa05166  Human T-cell leukemia virus 1 infection
hsa05202  Transcriptional misregulation in cancer
Network
nt06140  Transcription (viruses)
nt06160  Human T-cell leukemia virus 1 (HTLV-1)
nt06240  Transcription
  Element
N00117  E2A-PBX1 fusion to transcriptional activation
N00121  LMO2-rearrangement to transcriptional activation
N00122  LMO2-rearrangement to transcriptional repression
N00511  HTLV-1 Tax to E47-mediated transcription
Disease
H00001  B-cell acute lymphoblastic leukemia
H00085  Agammaglobulinemias
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    6929 (TCF3)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    6929 (TCF3)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    6929 (TCF3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    6929 (TCF3)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Ubiquitous (class A) factors
    6929 (TCF3)
SSDB
Motif
Pfam: HLH Response_reg_2
Other DBs
NCBI-GeneID: 6929
NCBI-ProteinID: NP_003191
OMIM: 147141
HGNC: 11633
Ensembl: ENSG00000071564
Vega: OTTHUMG00000180031
Pharos: P15923(Tbio)
UniProt: P15923
Structure
LinkDB
Position
19:complement(1609292..1652615)
AA seq 654 aa
MNQPQRMAPVGTDKELSDLLDFSMMFPLPVTNGKGRPASLAGAQFGGSGLEDRPSSGSWG
SGDQSSSSFDPSRTFSEGTHFTESHSSLSSSTFLGPGLGGKSGERGAYASFGRDAGVGGL
TQAGFLSGELALNSPGPLSPSGMKGTSQYYPSYSGSSRRRAADGSLDTQPKKVRKVPPGL
PSSVYPPSSGEDYGRDATAYPSAKTPSSTYPAPFYVADGSLHPSAELWSPPGQAGFGPML
GGGSSPLPLPPGSGPVGSSGSSSTFGGLHQHERMGYQLHGAEVNGGLPSASSFSSAPGAT
YGGVSSHTPPVSGADSLLGSRGTTAGSSGDALGKALASIYSPDHSSNNFSSSPSTPVGSP
QGLAGTSQWPRAGAPGALSPSYDGGLHGLQSKIEDHLDEAIHVLRSHAVGTAGDMHTLLP
GHGALASGFTGPMSLGGRHAGLVGGSHPEDGLAGSTSLMHNHAALPSQPGTLPDLSRPPD
SYSGLGRAGATAAASEIKREEKEDEENTSAADHSEEEKKELKAPRARTSPDEDEDDLLPP
EQKAEREKERRVANNARERLRVRDINEAFKELGRMCQLHLNSEKPQTKLLILHQAVSVIL
NLEQQVRERNLNPKAACLKRREEEKVSGVVGDPQMVLSAPHPGLSEAHNPAGHM
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgaaccagccgcagaggatggcgcctgtgggcacagacaaggagctcagtgacctcctg
gacttcagcatgatgttcccgctgcctgtcaccaacgggaagggccggcccgcctccctg
gccggggcgcagttcggaggttcaggtcttgaggaccggcccagctcaggctcctggggc
agcggcgaccagagcagctcctcctttgaccccagccggaccttcagcgagggcacccac
ttcactgagtcgcacagcagcctctcttcatccacattcctgggaccgggactcggaggc
aagagcggtgagcggggcgcctatgcctccttcgggagagacgcaggcgtgggcggcctg
actcaggctggcttcctgtcaggcgagctggccctcaacagccccgggcccctgtcccct
tcgggcatgaaggggacctcccagtactacccctcctactccggcagctcccggcggaga
gcggcagacggcagcctagacacgcagcccaagaaggtccggaaggtcccgccgggtctt
ccatcctcggtgtacccacccagctcaggtgaggactacggcagggatgccaccgcctac
ccgtccgccaagacccccagcagcacctatcccgcccccttctacgtggcagatggcagc
ctgcacccctcagccgagctctggagtcccccgggccaggcgggcttcgggcccatgctg
ggtgggggctcatccccgctgcccctcccgcccggtagcggcccggtgggcagcagtgga
agcagcagcacgtttggtggcctgcaccagcacgagcgtatgggctaccagctgcatgga
gcagaggtgaacggtgggctcccatctgcatcctccttctcctcagcccccggagccacg
tacggcggcgtctccagccacacgccgcctgtcagcggggccgacagcctcctgggctcc
cgagggaccacagctggcagctccggggatgccctcggcaaagcactggcctcgatctac
tccccggatcactcaagcaataacttctcgtccagcccttctacccccgtgggctccccc
cagggcctggcaggaacgtcacagtggcctcgagcaggagcccccggtgccttatcgccc
agctacgacgggggtctccacggcctgcagagtaagatagaagaccacctggacgaggcc
atccacgtgctccgcagccacgccgtgggcacagccggcgacatgcacacgctgctgcct
ggccacggggcgctggcctcaggtttcaccggccccatgtcactgggcgggcggcacgca
ggcctggttggaggcagccaccccgaggacggcctcgcaggcagcaccagcctcatgcac
aaccacgcggccctccccagccagccaggcaccctccctgacctgtctcggcctcccgac
tcctacagtgggctagggcgagcaggtgccacggcggccgccagcgagatcaagcgggag
gagaaggaggacgaggagaacacgtcagcggctgaccactcggaggaggagaagaaggag
ctgaaggccccccgggcccggaccagcccagacgaggacgaggacgaccttctcccccca
gagcagaaggccgagcgggagaaggagcgccgggtggccaataacgcccgggagcggctg
cgggtccgtgacatcaacgaggcctttaaggagctggggcgcatgtgccaactgcacctc
aacagcgagaagccccagaccaaactgctcatcctgcaccaggctgtctcggtcatcctg
aacttggagcagcaagtgcgagagcggaacctgaatcccaaagcagcctgtttgaaacgg
cgagaagaggaaaaggtgtcaggtgtggttggagacccccagatggtgctttcagctccc
cacccaggcctgagcgaagcccacaaccccgccgggcacatgtga

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