Homo sapiens (human): 4436
Help
Entry
4436 CDS
T01001
Symbol
MSH2, COCA1, FCC1, HNPCC, HNPCC1, LCFS2, LYNCH1, MMRCS2, MSH-2, hMSH2
Name
(RefSeq) mutS homolog 2
KO
K08735
DNA mismatch repair protein MSH2
Organism
hsa
Homo sapiens (human)
Pathway
hsa01524
Platinum drug resistance
hsa03430
Mismatch repair
hsa05200
Pathways in cancer
hsa05210
Colorectal cancer
Network
nt06503
Mismatch repair
Element
N01432
Mismatch repair
Disease
H00020
Colorectal cancer
H00027
Ovarian cancer
H00876
Mismatch repair deficiency
H02565
Hereditary nonpolyposis colorectal cancer
H02566
Muir-Torre syndrome
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
4436 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
4436 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
4436 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
4436 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsa03400
]
4436 (MSH2)
DNA repair and recombination proteins [BR:
hsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
4436 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_27
Motif
Other DBs
NCBI-GeneID:
4436
NCBI-ProteinID:
NP_000242
OMIM:
609309
HGNC:
7325
Ensembl:
ENSG00000095002
Pharos:
P43246
(Tbio)
UniProt:
P43246
Structure
PDB
PDBj
LinkDB
All DBs
Position
2:47403067..47709830
Genome browser
AA seq
934 aa
AA seq
DB search
MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT
QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
YKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD
LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHV
IECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMS
EENITIKLKQLKAEVIAKNNSFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggagacgctgcagttggagagcgcggccgaggtcggcttcgtg
cgcttctttcagggcatgccggagaagccgaccaccacagtgcgccttttcgaccggggc
gacttctatacggcgcacggcgaggacgcgctgctggccgcccgggaggtgttcaagacc
cagggggtgatcaagtacatggggccggcaggagcaaagaatctgcagagtgttgtgctt
agtaaaatgaattttgaatcttttgtaaaagatcttcttctggttcgtcagtatagagtt
gaagtttataagaatagagctggaaataaggcatccaaggagaatgattggtatttggca
tataaggcttctcctggcaatctctctcagtttgaagacattctctttggtaacaatgat
atgtcagcttccattggtgttgtgggtgttaaaatgtccgcagttgatggccagagacag
gttggagttgggtatgtggattccatacagaggaaactaggactgtgtgaattccctgat
aatgatcagttctccaatcttgaggctctcctcatccagattggaccaaaggaatgtgtt
ttacccggaggagagactgctggagacatggggaaactgagacagataattcaaagagga
ggaattctgatcacagaaagaaaaaaagctgacttttccacaaaagacatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagagcagatgaatagtgctgtattgccagaa
atggagaatcaggttgcagtttcatcactgtctgcggtaatcaagtttttagaactctta
tcagatgattccaactttggacagtttgaactgactacttttgacttcagccagtatatg
aaattggatattgcagcagtcagagcccttaacctttttcagggttctgttgaagatacc
actggctctcagtctctggctgccttgctgaataagtgtaaaacccctcaaggacaaaga
cttgttaaccagtggattaagcagcctctcatggataagaacagaatagaggagagattg
aatttagtggaagcttttgtagaagatgcagaattgaggcagactttacaagaagattta
cttcgtcgattcccagatcttaaccgacttgccaagaagtttcaaagacaagcagcaaac
ttacaagattgttaccgactctatcagggtataaatcaactacctaatgttatacaggct
ctggaaaaacatgaaggaaaacaccagaaattattgttggcagtttttgtgactcctctt
actgatcttcgttctgacttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcctaatctcagtgaa
ttaagagaaataatgaatgacttggaaaagaagatgcagtcaacattaataagtgcagcc
agagatcttggcttggaccctggcaaacagattaaactggattccagtgcacagtttgga
tattactttcgtgtaacctgtaaggaagaaaaagtccttcgtaacaataaaaactttagt
actgtagatatccagaagaatggtgttaaatttaccaacagcaaattgacttctttaaat
gaagagtataccaaaaataaaacagaatatgaagaagcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccaatgcagacactcaatgatgtgttagct
cagctagatgctgttgtcagctttgctcacgtgtcaaatggagcacctgttccatatgta
cgaccagccattttggagaaaggacaaggaagaattatattaaaagcatccaggcatgct
tgtgttgaagttcaagatgaaattgcatttattcctaatgacgtatactttgaaaaagat
aaacagatgttccacatcattactggccccaatatgggaggtaaatcaacatatattcga
caaactggggtgatagtactcatggcccaaattgggtgttttgtgccatgtgagtcagca
gaagtgtccattgtggactgcatcttagcccgagtaggggctggtgacagtcaattgaaa
ggagtctccacgttcatggctgaaatgttggaaactgcttctatcctcaggtctgcaacc
aaagattcattaataatcatagatgaattgggaagaggaacttctacctacgatggattt
gggttagcatgggctatatcagaatacattgcaacaaagattggtgctttttgcatgttt
gcaacccattttcatgaacttactgccttggccaatcagataccaactgttaataatcta
catgtcacagcactcaccactgaagagaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcaaagttttgggattcatgttgcagagcttgctaatttccctaagcatgta
atagagtgtgctaaacagaaagccctggaacttgaggagtttcagtatattggagaatcg
caaggatatgatatcatggaaccagcagcaaagaagtgctatctggaaagagagcaaggt
gaaaaaattattcaggagttcctgtccaaggtgaaacaaatgccctttactgaaatgtca
gaagaaaacatcacaataaagttaaaacagctaaaagctgaagtaatagcaaagaataat
agctttgtaaatgaaatcatttcacgaataaaagttactacgtga
DBGET
integrated database retrieval system