KEGG   Homo sapiens (human): 4747
Entry
4747              CDS       T01001                                 
Symbol
NEFL, CMT1F, CMT2E, CMTDIG, NF-L, NF68, NFL, PPP1R110
Name
(RefSeq) neurofilament light chain
  KO
K04572  neurofilament light polypeptide
Organism
hsa  Homo sapiens (human)
Pathway
hsa05014  Amyotrophic lateral sclerosis
hsa05022  Pathways of neurodegeneration - multiple diseases
Network
nt06541  Cytoskeleton in neurons
  Element
N01853  Neurofilament structure
N01854  Neurofilament regulation, ubiqutination by TRIM2
N01855  Neurofilament regulation, ubiqutination by Gigaxonin
Disease
H00264  Charcot-Marie-Tooth disease
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    4747 (NEFL)
   05022 Pathways of neurodegeneration - multiple diseases
    4747 (NEFL)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hsa01009]
    4747 (NEFL)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hsa04812]
    4747 (NEFL)
Protein phosphatases and associated proteins [BR:hsa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     4747 (NEFL)
Cytoskeleton proteins [BR:hsa04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type IV
     4747 (NEFL)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 TPR_MLP1_2 T2SSM_b
Other DBs
NCBI-GeneID: 4747
NCBI-ProteinID: NP_006149
OMIM: 162280
HGNC: 7739
Ensembl: ENSG00000277586
UniProt: P07196
LinkDB
Position
8:complement(24950955..24956612)
AA seq 543 aa
MSSFSYEPYYSTSYKRRYVETPRVHISSVRSGYSTARSAYSSYSAPVSSSLSVRRSYSSS
SGSLMPSLENLDLSQVAAISNDLKSIRTQEKAQLQDLNDRFASFIERVHELEQQNKVLEA
ELLVLRQKHSEPSRFRALYEQEIRDLRLAAEDATNEKQALQGEREGLEETLRNLQARYEE
EVLSREDAEGRLMEARKGADEAALARAELEKRIDSLMDEISFLKKVHEEEIAELQAQIQY
AQISVEMDVTKPDLSAALKDIRAQYEKLAAKNMQNAEEWFKSRFTVLTESAAKNTDAVRA
AKDEVSESRRLLKAKTLEIEACRGMNEALEKQLQELEDKQNADISAMQDTINKLENELRT
TKSEMARYLKEYQDLLNVKMALDIEIAAYRKLLEGEETRLSFTSVGSITSGYSQSSQVFG
RSAYGGLQTSSYLMSTRSFPSYYTSHVQEEQIEVEETIEAAKAEEAKDEPPSEGEAEEEE
KDKEEAEEEEAAEEEEAAKEESEEAKEEEEGGEGEEGEETKEAEEEEKKVEGAGEEQAAK
KKD
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgagttccttcagctacgagccgtactactcgacctcctacaagcggcgctacgtggag
acgccccgggtgcacatctccagcgtgcgcagcggctacagcaccgcacgctcagcttac
tccagctactcggcgccggtgtcttcctcgctgtccgtgcgccgcagctactcctccagc
tctggatcgttgatgcccagtctggagaacctcgacctgagccaggtagccgccatcagc
aacgacctcaagtccatccgcacgcaggagaaggcgcagctccaggacctcaatgaccgc
ttcgccagcttcatcgagcgcgtgcacgagctggagcagcagaacaaggtcctggaagcc
gagctgctggtgctgcgccagaagcactccgagccatcccgcttccgggcgctgtacgag
caggagatccgcgacctgcgcctggcggcggaagatgccaccaacgagaagcaggcgctc
cagggcgagcgcgaagggctggaggagaccctgcgcaacctgcaggcgcgctatgaagag
gaggtgctgagccgcgaggacgccgagggccggctgatggaagcgcgcaaaggcgccgac
gaggcggcgctcgctcgcgccgagctcgagaagcgcatcgacagcttgatggacgaaatc
tcttttctgaagaaagtgcacgaagaggagatcgccgaactgcaggcgcagatccagtac
gcgcagatctccgtggagatggacgtgaccaagcccgacctttccgccgcgctcaaggac
atccgcgcgcagtacgagaagctggccgccaagaacatgcagaacgctgaggaatggttc
aagagccgcttcaccgtgctgaccgagagcgccgccaagaacaccgacgccgtgcgcgcc
gccaaggacgaggtgtccgagagccgtcgtctgctcaaggccaagaccctggaaatcgaa
gcatgccggggcatgaatgaagcgctggagaagcagctgcaggagctggaggacaagcag
aacgccgacatcagcgctatgcaggacacgatcaacaaattagaaaatgaattgaggacc
acaaagagtgaaatggcacgatacctaaaagaataccaagacctcctcaacgtgaagatg
gctttggatattgagattgcagcttacaggaaactcttggaaggcgaggagacccgactc
agtttcaccagcgtgggaagcataaccagtggctactcccagagctcccaggtctttggc
cgatctgcctacggcggtttacagaccagctcctatctgatgtccacccgctccttcccg
tcctactacaccagccatgtccaagaggagcagatcgaagtggaggaaaccattgaggct
gccaaggctgaggaagccaaggatgagcccccctctgaaggagaagccgaggaggaggag
aaggacaaggaagaggccgaggaagaggaggcagctgaagaggaagaagctgccaaggaa
gagtctgaagaagcaaaagaagaagaagaaggaggtgaaggtgaagaaggagaggaaacc
aaagaagctgaagaggaggagaagaaagttgaaggtgctggggaggaacaagcagctaag
aagaaagattga

KEGG   Homo sapiens (human): 4741
Entry
4741              CDS       T01001                                 
Symbol
NEFM, NEF3, NF-M, NFM
Name
(RefSeq) neurofilament medium chain
  KO
K04573  neurofilament medium polypeptide (neurofilament 3)
Organism
hsa  Homo sapiens (human)
Pathway
hsa05014  Amyotrophic lateral sclerosis
hsa05022  Pathways of neurodegeneration - multiple diseases
Network
nt06541  Cytoskeleton in neurons
  Element
N01853  Neurofilament structure
N01855  Neurofilament regulation, ubiqutination by Gigaxonin
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    4741 (NEFM)
   05022 Pathways of neurodegeneration - multiple diseases
    4741 (NEFM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hsa04812]
    4741 (NEFM)
Cytoskeleton proteins [BR:hsa04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type IV
     4741 (NEFM)
SSDB
Motif
Pfam: Filament Filament_head ATG14 DUF1664
Other DBs
NCBI-GeneID: 4741
NCBI-ProteinID: NP_005373
OMIM: 162250
HGNC: 7734
Ensembl: ENSG00000104722
UniProt: P07197
LinkDB
Position
8:24913761..24919093
AA seq 916 aa
MSYTLDSLGNPSAYRRVTETRSSFSRVSGSPSSGFRSQSWSRGSPSTVSSSYKRSMLAPR
LAYSSAMLSSAESSLDFSQSSSLLNGGSGPGGDYKLSRSNEKEQLQGLNDRFAGYIEKVH
YLEQQNKEIEAEIQALRQKQASHAQLGDAYDQEIRELRATLEMVNHEKAQVQLDSDHLEE
DIHRLKERFEEEARLRDDTEAAIRALRKDIEEASLVKVELDKKVQSLQDEVAFLRSNHEE
EVADLLAQIQASHITVERKDYLKTDISTALKEIRSQLESHSDQNMHQAEEWFKCRYAKLT
EAAEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSYQ
DTIQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFAGSIT
GPLYTHRPPITISSKIQKPKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTAITEEL
AVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEED
EGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEE
LVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSP
VEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEK
KEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGE
GGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKEKGSGREEEKGVVTNGLDLSPAD
EKKGGDKSEEKVVVTKTVEKITSEGGDGATKYITKSVTVTQKVEEHEETFEEKLVSTKKV
EKVTSHAIVKEVTQSD
NT seq 2751 nt   +upstreamnt  +downstreamnt
atgagctacacgttggactcgctgggcaacccgtccgcctaccggcgggtaaccgagacc
cgctcgagcttcagccgcgtcagcggctccccgtccagtggcttccgctcgcagtcgtgg
tcccgcggctcgcccagcaccgtgtcctcctcctataagcgcagcatgctcgccccgcgc
ctcgcttacagctcggccatgctcagctccgccgagagcagccttgacttcagccagtcc
tcgtccctgctcaacggcggctccggacccggcggcgactacaagctgtcccgctccaac
gagaaggagcagctgcaggggctgaacgaccgctttgccggctacatagagaaggtgcac
tacctggagcagcagaataaggagattgaggcggagatccaggcgctgcggcagaagcag
gcctcgcacgcccagctgggcgacgcgtacgaccaggagatccgcgagctgcgcgccacc
ctggagatggtgaaccacgagaaggctcaggtgcagctggactcggaccacctggaggaa
gacatccaccggctcaaggagcgctttgaggaggaggcgcggttgcgcgacgacactgag
gcggccatccgcgcgctgcgcaaagacatcgaggaggcgtcgctggtcaaggtggagctg
gacaagaaggtgcagtcgctgcaggatgaggtggccttcctgcggagcaaccacgaggag
gaggtggccgaccttctggcccagatccaggcatcgcacatcacggtggagcgcaaagac
tacctgaagacagacatctcgacggcgctgaaggaaatccgctcccagctcgaaagccac
tcagaccagaatatgcaccaggccgaagagtggttcaaatgccgctacgccaagctcacc
gaggcggccgagcagaacaaggaggccatccgctccgccaaggaagagatcgccgagtac
cggcgccagctgcagtccaagagcatcgagctagagtcggtgcgcggcaccaaggagtcc
ctggagcggcagctcagcgacatcgaggagcgccacaaccacgacctcagcagctaccag
gacaccatccagcagctggaaaatgagcttcggggcacaaagtgggaaatggctcgtcat
ttgcgcgaataccaggacctcctcaacgtcaagatggctctggatatagaaatcgctgcg
tacagaaaactcctggagggtgaagagactagatttagcacatttgcaggaagcatcact
gggccactgtatacacaccgacccccaatcacaatatccagtaagattcagaaacccaag
gtggaagctcccaagcttaaggtccaacacaaatttgtcgaggagatcatagaggaaacc
aaagtggaggatgagaagtcagaaatggaagaggccctgacagccattacagaggaattg
gccgtttccatgaaggaagagaagaaagaagcagcagaagaaaaggaagaggaacccgaa
gctgaagaagaagaagtagctgccaaaaagtctccagtgaaagcaactgcacctgaagtt
aaagaagaggaaggggaaaaggaggaagaagaaggccaggaagaagaggaggaagaagat
gagggagctaagtcagaccaagccgaagagggaggatccgagaaggaaggctctagtgaa
aaagaggaaggtgagcaggaagaaggagaaacagaagctgaagctgaaggagaggaagcc
gaagctaaagaggaaaagaaagtggaggaaaagagtgaggaagtggctaccaaggaggag
ctggtggcagatgccaaggtggaaaagccagaaaaagccaagtctcctgtgccaaaatca
ccagtggaagagaaaggcaagtctcctgtgcccaagtcaccagtggaagagaaaggcaag
tctcctgtgcccaagtcaccagtggaagagaaaggcaagtctcctgtgccgaaatcacca
gtggaagagaaaggcaagtctcctgtgtcaaaatcaccagtggaagagaaagccaaatct
cctgtgccaaaatcaccagtggaagaggcaaagtcaaaagcagaagtggggaaaggtgaa
cagaaagaggaagaagaaaaggaagtcaaggaagctcccaaggaagagaaggtagagaaa
aaggaagagaaaccaaaggatgtgccagagaagaagaaagctgagtcccctgtaaaggag
gaagctgtggcagaggtggtcaccatcaccaaatcggtaaaggtgcacttggagaaagag
accaaagaagaggggaagccactgcagcaggagaaagagaaggagaaagcgggaggagag
ggaggaagtgaggaggaagggagtgataaaggtgccaagggatccaggaaggaagacata
gctgtcaatggggaggtagaaggaaaagaggaggtagagcaggagaccaaggaaaaaggc
agtgggagggaagaggagaaaggcgttgtcaccaatggcctagacttgagcccagcagat
gaaaagaaggggggtgataaaagtgaggagaaagtggtggtgaccaaaacggtagaaaaa
atcaccagtgaggggggagatggtgctaccaaatacatcactaaatctgtaaccgtcact
caaaaggttgaagagcatgaagagacctttgaggagaaactagtgtctactaaaaaggta
gaaaaagtcacttcacacgccatagtaaaggaagtcacccagagtgactaa

KEGG   Homo sapiens (human): 4744
Entry
4744              CDS       T01001                                 
Symbol
NEFH, CMT2CC, NFH
Name
(RefSeq) neurofilament heavy chain
  KO
K04574  neurofilament heavy polypeptide
Organism
hsa  Homo sapiens (human)
Pathway
hsa05014  Amyotrophic lateral sclerosis
hsa05022  Pathways of neurodegeneration - multiple diseases
Network
nt06541  Cytoskeleton in neurons
  Element
N01853  Neurofilament structure
N01855  Neurofilament regulation, ubiqutination by Gigaxonin
Disease
H00058  Amyotrophic lateral sclerosis (ALS)
H00264  Charcot-Marie-Tooth disease
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    4744 (NEFH)
   05022 Pathways of neurodegeneration - multiple diseases
    4744 (NEFH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hsa04812]
    4744 (NEFH)
Cytoskeleton proteins [BR:hsa04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type IV
     4744 (NEFH)
SSDB
Motif
Pfam: Filament DUF1388 RasGAP_C
Other DBs
NCBI-GeneID: 4744
NCBI-ProteinID: NP_066554
OMIM: 162230
HGNC: 7737
Ensembl: ENSG00000100285
UniProt: P12036
LinkDB
Position
22:29480218..29491390
AA seq 1020 aa
MMSFGGADALLGAPFAPLHGGGSLHYALARKGGAGGTRSAAGSSSGFHSWTRTSVSSVSA
SPSRFRGAGAASSTDSLDTLSNGPEGCMVAVATSRSEKEQLQALNDRFAGYIDKVRQLEA
HNRSLEGEAAALRQQQAGRSAMGELYEREVREMRGAVLRLGAARGQLRLEQEHLLEDIAH
VRQRLDDEARQREEAEAAARALARFAQEAEAARVDLQKKAQALQEECGYLRRHHQEEVGE
LLGQIQGSGAAQAQMQAETRDALKCDVTSALREIRAQLEGHAVQSTLQSEEWFRVRLDRL
SEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKDSLERQRSELEDRHQADIASY
QEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECRIGFGPIPF
SLPEGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKE
EEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKS
PAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKS
PEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEA
KSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPE
KAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADK
FPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPK
KAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDK
KKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEE
KAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAAKGK
NT seq 3063 nt   +upstreamnt  +downstreamnt
atgatgagcttcggcggcgcggacgcgctgctgggcgccccgttcgcgccgctgcatggc
ggcggcagcctccactacgcgctagcccgaaagggtggcgcaggcgggacgcgctccgcc
gctggctcctccagcggcttccactcgtggacacggacgtccgtgagctccgtgtccgcc
tcgcccagccgcttccgtggcgcaggcgccgcctcaagcaccgactcgctggacacgctg
agcaacgggccggagggctgcatggtggcggtggccacctcacgcagtgagaaggagcag
ctgcaggcgctgaacgaccgcttcgccgggtacatcgacaaggtgcggcagctggaggcg
cacaaccgcagcctggagggcgaggctgcggcgctgcggcagcagcaggcgggccgctcc
gctatgggcgagctgtacgagcgcgaggtccgcgagatgcgcggcgcggtgctgcgcctg
ggcgcggcgcgcggtcagctacgcctggagcaggagcacctgctcgaggacatcgcgcac
gtgcgccagcgcctagacgacgaggcccggcagcgagaggaggccgaggcggcggcccgc
gcgctggcgcgcttcgcgcaggaggccgaggcggcgcgcgtggacctgcagaagaaggcg
caggcgctgcaggaggagtgcggctacctgcggcgccaccaccaggaagaggtgggcgag
ctgctcggccagatccagggctccggcgccgcgcaggcgcagatgcaggccgagacgcgc
gacgccctgaagtgcgacgtgacgtcggcgctgcgcgagattcgcgcgcagcttgaaggc
cacgcggtgcagagcacgctgcagtccgaggagtggttccgagtgaggctggaccgactg
tcggaggcagccaaggtgaacacagacgctatgcgctcagcgcaggaggagataactgag
taccggcgtcagctgcaggccaggaccacagagctggaggcactgaaaagcaccaaggac
tcactggagaggcagcgctctgagctggaggaccgtcatcaggccgacattgcctcctac
caggaagccattcagcagctggacgctgagctgaggaacaccaagtgggagatggccgcc
cagctgcgagaataccaggacctgctcaatgtcaagatggctctggatatagagatagcc
gcttacagaaaactcctggaaggtgaagagtgtcggattggctttggcccaattcctttc
tcgcttccagaaggactccccaaaattccctctgtgtccactcacataaaggtgaaaagc
gaagagaagatcaaagtggtggagaagtctgagaaagaaactgtgattgtggaggaacag
acagaggagacccaagtgactgaagaagtgactgaagaagaggagaaagaggccaaagag
gaggagggcaaggaggaagaagggggtgaagaagaggaggcagaagggggagaagaagaa
acaaagtctcccccagcagaagaggctgcatccccagagaaggaagccaagtcaccagta
aaggaagaggcaaagtcaccggctgaggccaagtccccagagaaggaggaagcaaaatcc
ccagccgaagtcaagtcccctgagaaggccaagtctccagcaaaggaagaggcaaagtca
ccgcctgaggccaagtccccagagaaggaggaagcaaaatctccagctgaggtcaagtcc
cccgagaaggccaagtccccagcaaaggaagaggcaaagtcaccggctgaggccaagtct
ccagagaaggccaagtccccagtgaaggaagaagcaaagtcaccggctgaggccaagtcc
ccagtgaaggaagaagcaaaatctccagctgaggtcaagtccccggaaaaggccaagtct
ccaacgaaggaggaagcaaagtcccctgagaaggccaagtccccagagaaggaagaggcc
aagtcccctgagaaggccaagtccccagtgaaggcagaagcaaagtcccctgagaaggcc
aagtccccagtgaaggcagaagcaaagtcccctgagaaggccaagtccccagtgaaggaa
gaagcaaagtcccctgagaaggccaagtccccagtgaaggaagaagcaaagtcccctgag
aaggccaagtccccagtgaaggaagaagcaaagacccccgagaaggccaagtccccagtg
aaggaagaagctaagtccccagagaaggccaagtccccagagaaggccaagactcttgat
gtgaagtctccagaagccaagactccagcgaaggaggaagcaaggtcccctgcagacaaa
ttccctgaaaaggccaaaagccctgtcaaggaggaggtcaagtccccagagaaggcgaaa
tctcccctgaaggaggatgccaaggcccctgagaaggagatcccaaaaaaggaagaggtg
aagtccccagtgaaggaggaggagaagccccaggaggtgaaagtcaaagagcccccaaag
aaggcagaggaagagaaagcccctgccacaccaaaaacagaggagaagaaggacagcaag
aaagaggaggcacccaagaaggaggctccaaagcccaaggtggaggagaagaaggaacct
gctgtcgaaaagcccaaagaatccaaagttgaagccaagaaggaagaggctgaagataag
aaaaaagtccccaccccagagaaggaggctcctgccaaggtggaggtgaaggaagacgct
aaacccaaagaaaagacagaggtagccaagaaggaaccagatgatgccaaggccaaggaa
cccagcaaaccagcagagaagaaggaggcagcaccggagaaaaaagacaccaaggaggag
aaggccaagaagcctgaggagaaacccaagacagaggccaaagccaaggaagatgacaag
accctctcaaaagagcctagcaagcctaaggcagaaaaggctgaaaaatcctccagcaca
gaccaaaaagacagcaagcctccagagaaggccacagaagacaaggccgccaaggggaag
taa

KEGG   Homo sapiens (human): 7431
Entry
7431              CDS       T01001                                 
Symbol
VIM
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
hsa  Homo sapiens (human)
Pathway
hsa04820  Cytoskeleton in muscle cells
hsa05169  Epstein-Barr virus infection
hsa05206  MicroRNAs in cancer
Network
nt06539  Cytoskeleton in muscle cells
nt06541  Cytoskeleton in neurons
  Element
N01758  Desmosome - Vimentin filaments
N01855  Neurofilament regulation, ubiqutination by Gigaxonin
Disease
H01202  Cataract
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    7431 (VIM)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    7431 (VIM)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    7431 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    7431 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hsa04812]
    7431 (VIM)
   04147 Exosome [BR:hsa04147]
    7431 (VIM)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     7431 (VIM)
Cytoskeleton proteins [BR:hsa04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     7431 (VIM)
Exosome [BR:hsa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   7431 (VIM)
  Exosomal proteins of other cancer cells
   7431 (VIM)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 TolA_bind_tri DUF7491 GeBP-like_DBD TPR_MLP1_2 RBD-FIP DUF4515 CENP-F_leu_zip
Other DBs
NCBI-GeneID: 7431
NCBI-ProteinID: NP_003371
OMIM: 193060
HGNC: 12692
Ensembl: ENSG00000026025
UniProt: P08670 V9HWE1
Structure
LinkDB
Position
10:17228241..17237593
AA seq 466 aa
MSTRSVSSSSYRRMFGGPGTASRPSSSRSYVTTSTRTYSLGSALRPSTSRSLYASSPGGV
YATRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE
DIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEE
EIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESTEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggcccgggcacc
gcgagccggccgagctccagccggagctacgtgactacgtccacccgcacctacagcctg
ggcagcgcgctgcgccccagcaccagccgcagcctctacgcctcgtccccgggcggcgtg
tatgccacgcgctcctctgccgtgcgcctgcggagcagcgtgcccggggtgcggctcctg
caggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaggtggagctgcaggagctgaatgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaataagatcctgctggccgagctcgagcagctcaagggc
caaggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagctgcgccggcag
gtggaccagctaaccaacgacaaagcccgcgtcgaggtggagcgcgacaacctggccgag
gacatcatgcgcctccgggagaaattgcaggaggagatgcttcagagagaggaagccgaa
aacaccctgcaatctttcagacaggatgttgacaatgcgtctctggcacgtcttgacctt
gaacgcaaagtggaatctttgcaagaagagattgcctttttgaagaaactccacgaagag
gaaatccaggagctgcaggctcagattcaggaacagcatgtccaaatcgatgtggatgtt
tccaagcctgacctcacggctgccctgcgtgacgtacgtcagcaatatgaaagtgtggct
gccaagaacctgcaggaggcagaagaatggtacaaatccaagtttgctgacctctctgag
gctgccaaccggaacaatgacgccctgcgccaggcaaagcaggagtccactgagtaccgg
agacaggtgcagtccctcacctgtgaagtggatgcccttaaaggaaccaatgagtccctg
gaacgccagatgcgtgaaatggaagagaactttgccgttgaagctgctaactaccaagac
actattggccgcctgcaggatgagattcagaatatgaaggaggaaatggctcgtcacctt
cgtgaataccaagacctgctcaatgttaagatggcccttgacattgagattgccacctac
aggaagctgctggaaggcgaggagagcaggatttctctgcctcttccaaacttttcctcc
ctgaacctgagggaaactaatctggattcactccctctggttgatacccactcaaaaagg
acacttctgattaagacggttgaaactagagatggacaggttatcaacgaaacttctcag
catcacgatgaccttgaataa

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