Homo sapiens (human): 51362
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Entry
51362 CDS
T01001
Symbol
CDC40, EHB3, PCH15, PRP17, PRPF17
Name
(RefSeq) cell division cycle 40
KO
K12816
pre-mRNA-processing factor 17
Organism
hsa
Homo sapiens (human)
Pathway
hsa03040
Spliceosome
Disease
H00897
Pontocerebellar hypoplasia
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
51362 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsa03041
]
51362 (CDC40)
Spliceosome [BR:
hsa03041
]
Complex C
Other components
Step II factors
51362 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
PQQ_2
Motif
Other DBs
NCBI-GeneID:
51362
NCBI-ProteinID:
NP_056975
OMIM:
605585
HGNC:
17350
Ensembl:
ENSG00000168438
Vega:
OTTHUMG00000015358
Pharos:
O60508
(Tbio)
UniProt:
O60508
Structure
PDB
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All DBs
Position
6:110180427..110232232
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AA seq
579 aa
AA seq
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MSAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgcgattgcagctctggccgcttcctatggttcgggttcagggtccgaatcg
gactcggacagtgagagcagtcggtgtccgctgccagccgccgactccctcatgcacttg
actaaatcgccttcatcaaagccgtctctagcagtggcagtggactcggctccggaggtg
gcagttaaggaagatttggagactggagttcaccttgaccctgccgtcaaagaagttcag
tataatcctacctatgagaccatgtttgctcctgagtttggaccagaaaatccctttagg
acacagcaaatggctgcccctagaaatatgctttctggatatgccgaaccagctcatatc
aatgatttcatgtttgagcagcaaaggagaacttttgcaacatatggttatgcattagac
ccttcattagataatcatcaagtgtctgctaaatatattggttctgtagaagaagctgaa
aaaaatcaaggtttaactgtatttgaaactggtcagaagaaaacagaaaagaggaaaaag
tttaaagaaaatgatgcatccaatattgatggttttttgggaccatgggcaaaatatgtg
gatgaaaaagatgtagccaaaccttcagaagaagagcaaaaagaattggatgaaatcaca
gcaaagaggcagaaaaaaggaaaacaggaagaagagaaacctggggaggagaagacaatc
ttacatgttaaagaaatgtatgactatcaaggcaggtcctatcttcacatacctcaggat
gttggtgttaatctacggtcaactatgccacctgagaagtgttatcttcccaaaaaacaa
attcatgtgtggtctggacacacaaagggcgtcagtgcagtcagattgtttcctctctct
ggccatttattgctgtcttgttccatggactgtaaaattaagctatgggaggtttatgga
gaacggcgctgtctgagaacatttattggtcacagtaaggctgttagggatatctgcttc
aatactgcaggaacacagttcctcagtgcagcctatgacaggtatcttaagctctgggac
actgagacaggacagtgtatatcaagatttacaaaccgaaaagtaccttattgtgtcaaa
ttcaatcctgatgaagataagcaaaatctctttgtggctgggatgtctgataagaagatt
gtgcaatgggacattcgaagtggagaaattgtgcaggaatatgatcggcatttgggagct
gtcaacaccattgtttttgtggatgagaataggagatttgtgagcacatctgatgataaa
agcctaagagtttgggaatgggatatccctgtggatttcaagtacatagcagaacccagt
atgcactcaatgcctgcagtgactttgtctccaaatggaaaatggctagcatgccaatca
atggacaaccaaatcttaatttttggagcacagaacagatttagattaaataagaaaaaa
atttttaagggccatatggtagcaggctatgcttgtcaggtggacttttcaccagacatg
agttatgtgatttcaggagatggaaatggaaaattaaacatttgggactggaagaccaca
aaactctacagtcgatttaaagctcatgataaagtgtgtataggtgcagtgtggcatcct
catgaaacttctaaggtcataacatgtggttgggatggtctcattaaattgtgggattaa
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