Homo sapiens (human): 54914
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Entry
54914 CDS
T01001
Symbol
FOCAD, KIAA1797, SCOLIV
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
hsa
Homo sapiens (human)
Disease
H02730
Severe congenital liver disease
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsa03019
]
54914 (FOCAD)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
54914 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
54914
NCBI-ProteinID:
NP_060264
OMIM:
614606
HGNC:
23377
Ensembl:
ENSG00000188352
UniProt:
Q5VW36
B3KNV9
LinkDB
All DBs
Position
9:20655625..20995950
Genome browser
AA seq
1801 aa
AA seq
DB search
MSDDIRKRFEFPNSLIQSQAVGHLIAAVLKENGFSEKIHQSTNQTPALNLLWEKCCSDNV
VVRTACCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHGLIKAIMHLLQMQALKEGQGG
EKNIQSIYTIRNHPHPLITVLEHRPDCWPVFLQQLTAFFQQCPERLEVSCIQIMAPFLWY
LYCEPSQLQEYAKLRLALLKVLLQPQVLCDKDQPSILEQQILQLCCDIVPCLQVKDLIQT
TEAMMFIEEVCLSLLRHPVFWKIQLTQMSLQLLCVSEVSLKITGECSSSIHLLEHSVELL
KEDFPVELVIIGIALLLLQTPASQQKPILNLALKLLSVTEDQKIPKSSLLLVMPILQILS
STALEDCISVDEEGPSRQQLALNLLEMIQQECYRDDHQKLSYKLVCPVTSMYGTIFTAWR
ILEVMTDSSAASDWLASVESLLPITAVIPAPAFLLLAHLLVEDKGQNLHQILKVTTELAQ
ADSSQVPNLIPVLMFKLGRPLEPILYNDILYTLPKLGVHKVCIGQILRIIQLLGTTPRLR
AVTLRLLTSLWEKQDRVYPELQRFMAVSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPY
QHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
PLILKTLSELFSLVPSLTVNTTEYENFKVQVLSFLWTHTQNKDPIVANAAYRSLANFSAG
EHTILHLPEKIRPEIPIPEELDDDEDVEDVDLSVPGSCYLKLLSLTPPLVLPALEEFFTS
LVKQEMVNMPRGIYHSALKGGARSDQGKTVAGIPNFILKMYETNKQPGLKPGLAGGMLFC
YDVSMYQSKDGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHRAIFLPQAWLAYMNRA
YHAILQGRLGELELQLKHGKEEPEEVQYKKSTAWLWVRDMLTDEITKAAAKESPVVKGNA
LLALSSLAVVVSRHEASLSSDSDGLLEVQPNFLSMKEWVSMVLDTLLVIVDSHYQPRGQL
LSWFYYKSYSGENTASAIARSAAATALSLLVPVFIISCKEKVEEILNMLTARLPGKPSAD
ESQAVQIHMGLALGMFLSRLCEEKLSDISGQEMNLLLMKSLDALENCCFDTSLEYNTGCI
LGVGLVLSLMSHSSQMQSRVHVAALLRKLSAHVDDSGSQSRTFQEVLAYTLSCVCTSAFS
AGIIEATEAEDVMNKLRLLVENSQQTSGFALALGNIVHGLSVCGHGKAEDLGSKLLPAWI
RIVLTEGTPTMLCLAALHGMVALVGSEGDVMQLKSEAIQTSHFQGRLNEVIRTLTQVISV
SGVIGLQSNAVWLLGHLHLSTLSSSQSRASVPTDYSYLPESSFIGAAIGFFITGGKKGPE
SVPPSLLKVVMKPIATVGESYQYPPVNWAALLSPLMRLNFGEEIQQLCLEIMVTQAQSSQ
NAAALLGLWVTPPLIHSLSLNTKRYLLISAPLWIKHISDEQILGFVENLMVAVFKAASPL
GSPELCPSALHGLSQAMKLPSPAHHLWSLLSEATGKIFDLLPNKIRRKDLELYISIAKCL
LEMTDDDANRIAQVTKSNIEKAAFVKLYLVSQGRFPLVNLTDMLSVAVQHREKEVLAWMI
LHSLYQARIVSHANTGVLKRMEWLLELMGYIRNVAYQSTSFHNTALDKALDFFLLIFATA
VVAWADHTAPLLLGLSASWLPWHQENGPAGPVPSFLGRSPMHRVTLQEVLTLLPNSMALL
LQKEPWKEQTQKFIDWLFSIMESPKEALSAQSRDLLKATLLSLRVLPEFKKKAVWTRAYG
W
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgatatcaggaaaaggtttgaatttccaaattctcttatccaatcacaggct
gtgggtcatcttattgctgcagtcctaaaggaaaatggtttttcagaaaagattcaccaa
tctacaaatcagactcctgctttgaacttgctgtgggagaagtgttgcagtgacaatgta
gtggttcgaacagcctgctgtgaaggtctggtggcactcgttgctcaggatcatgcagag
ttcagctatgttctcaatgggatactcaacttgattccatcaaccagaaatacacatggc
ttgataaaagccattatgcacttactacaaatgcaagctcttaaggaaggacaaggtggg
gaaaagaatattcagagtatatataccattagaaatcatcctcatcctttgataactgtg
cttgaacacagacctgattgctggccagtgtttttgcagcagctgacagcgtttttccag
cagtgccctgaaaggttagaagtttcatgcattcaaataatggcaccatttctgtggtat
ctgtattgtgaaccatctcagttacaagaatatgctaaactccgactagccctgctgaaa
gtcttacttcaaccccaggttctttgtgacaaagatcaaccatcaatactggaacagcag
atacttcaactgtgttgtgacatagttccatgtttgcaggtaaaagatttgatacagaca
acagaggcgatgatgtttattgaggaagtatgtttaagccttttgcgtcatcctgttttc
tggaaaattcagcttacccagatgagtcttcagctgctgtgtgtcagtgaagtcagctta
aagataactggtgaatgttcatcttcaattcaccttttagagcacagtgttgaacttctg
aaggaggattttcctgttgaactggtcataattggaatagctttactacttctacagact
ccagcaagtcagcagaagccaatcttaaatctagctttgaagctcctctctgttactgag
gatcagaaaatcccaaagtcctctctgctgctagtgatgccaattctgcagatactatct
tctactgccttggaagactgtatatctgtggatgaagaaggtccctctaggcagcagttg
gctctaaaccttttggaaatgatacagcaggaatgttacagagatgaccaccaaaagctc
tcctacaagcttgtgtgccctgtaaccagtatgtatggtacaatatttacagcctggagg
attcttgaagtaatgacagactcgtctgctgcaagtgactggttggcttcagtagagtca
ttgcttcctattactgctgtgatccctgcgcctgcctttcttctgctggctcacctcctt
gttgaagacaaaggacaaaatcttcaccaaatactcaaggtcactacagaattagcccaa
gcagattcctcccaggtgccaaatctgattccagttttgatgttcaaattgggaagacca
ctggaacctatattatataatgatatattgtatactttacctaagcttggtgttcacaag
gtgtgtataggacaaattctacgaataatacaactacttggaaccacaccacgactaaga
gctgtcactttgcgcttgctgacatctttgtgggaaaagcaggaccgagtctatcctgaa
ctgcagcgtttcatggctgtgtctgatgtaccttctctttcggtgggcaaggaagtccaa
tgggagaaactgattgcaaaagcagcatcaatcagagatatatgtaagcagaggccatat
caacatggtgcagatatgttggcagctatttctcaagtgttgaatgaatgcaccaagcct
gatcaagctactccagcagccttggtattacagggtcttcatgcactctgtcaagctgag
gttgtttgcattcgctccacttggaatgctctctctccaaagctgagttgtgacacaaga
cctctcattctgaagacactgagtgaactattttctctagttccttccttaacggtcaat
acaactgaatatgagaattttaaagttcaagtcctcagcttcctctggactcatactcaa
aacaaggacccaattgtagcaaatgctgcatatagatccctggccaactttagtgcagga
gaacacaccattcttcatctgcctgaaaagataagaccagaaattcccattcctgaagag
ttagatgacgatgaagatgttgaggatgtggatctttcagttcctggctcttgctatctc
aaactgttgtcactcactccccctttggttttaccagctttggaggaattttttacatca
cttgtgaagcaagaaatggtgaatatgcctcgtgggatatatcactctgcattaaaagga
ggtgcccgctcagaccaaggaaagactgtagcaggaatccccaattttatattgaaaatg
tatgaaacaaacaagcaaccaggactgaaacctggccttgcaggtggtatgttattttgc
tatgatgtttccatgtatcagagtaaagatggaaaaccattgaacagactgatggccagc
agagggcgaagtttcaagcagacttcacttgctcttgtacatgaggttcatatccagctt
tcagagtggcaccgtgcaatttttcttccacaggcctggcttgcatacatgaatcgagct
tatcatgccattttacagggaagactaggagagctggagttgcagttaaaacatggaaaa
gaagaacctgaggaggtgcagtacaaaaaaagcacagcctggctctgggttagagacatg
ctgactgatgagatcaccaaggcagctgcaaaggagagtccggtagtgaaaggcaatgcg
ctgttagctctaagcagccttgctgtcgtcgtatctagacatgaagccagcctctcctca
gactctgacgggctcctggaggttcaacctaatttcctttcaatgaaagagtgggtttcc
atggtacttgatacactcttggtcattgtggatagccattaccaacccagagggcaactt
ctctcctggttttattataagtcctattctggtgaaaacacagctagtgccattgcccgt
tctgctgccgccacggctttgtctctccttgtgccagttttcattatctcttgcaaagag
aaggttgaggaaatcctgaacatgctgactgccaggttacctgggaaaccaagtgctgat
gagtctcaagccgtgcaaatccacatgggccttgctttagggatgtttctctctcgcttg
tgtgaagagaaactcagtgatatatctggccaagagatgaaccttcttctgatgaagtcg
ttggatgccctggaaaattgctgctttgacactagtcttgaatacaacacgggctgtata
ttgggagttggacttgttctgtccctcatgagccacagcagccaaatgcagtcccgcgtt
cacgtagcagcattgctccggaagctgtctgcgcacgtagatgacagcgggagccagagc
agaacgtttcaggaggtccttgcctacacacttagctgtgtatgtacatcagcgttcagt
gctggaattattgaggctacagaggctgaggatgttatgaacaagcttcgactgttagtg
gagaatagccagcagacttcaggttttgccctggctttaggaaacatagttcatggattg
tctgtgtgtggacatggaaaagctgaagacttgggcagcaaactactccctgcctggatc
agaattgttctaacagagggcactcccacaatgctttgtctggcagctcttcatggcatg
gtggccttggtaggctctgaaggggatgtaatgcagctgaaatcagaagccatccagacc
tctcattttcaaggcagacttaatgaagtcattagaaccttaactcaggtcattagtgtc
tctggggtgattggtctccagtcaaatgcagtctggcttcttggacatcttcatctatct
actctatcctcaagtcaaagtagagcctctgttcctactgactatagctacttgcctgaa
agcagttttattggagcagctattggcttcttcattacaggaggaaaaaaaggtcctgaa
tctgtgcctccttcccttcttaaagtagtgatgaaacccatagcaactgttggagaaagc
taccaatatcctcctgtgaactgggctgcacttctctctccacttatgaggctaaatttt
ggtgaagagatccagcaactgtgccttgaaattatggtgacccaggcacagtcatcccag
aatgcagctgcactattgggcttgtgggtgacaccaccactgatccacagtctgagtctg
aataccaagagatatctcctgatatctgcacctctgtggataaaacacatctctgatgaa
cagatcctgggttttgttgaaaatttaatggtggcagtttttaaagcagcttccccactt
ggaagtcctgagctatgcccaagtgctttacacggtctgagccaggccatgaaactgccc
agccctgcccaccacctctggagtctgctctctgaagctactgggaaaatttttgacctc
ctgccaaataagattcggagaaaggatctagagctgtatatcagcatagcaaaatgcctc
ttagaaatgacagatgatgatgccaatcggatcgcccaggttactaagagcaacatagaa
aaagctgcctttgtcaaactgtacttagtctctcaaggacgattccccttggtgaacctg
accgatatgctgagcgttgctgtgcagcaccgtgagaaagaggtgttggcctggatgatt
ctgcacagcttataccaggcacggattgtgagccatgccaatacgggcgttttgaagaga
atggagtggctcttggaactgatgggttatattagaaatgttgcttaccagtcaacatcc
tttcacaatacggctcttgacaaggctttggacttcttcttgctgatatttgcaaccgca
gtggttgcatgggctgaccacactgcccctctcctcctcggcctcagtgccagttggttg
ccatggcatcaggagaatggcccggctgggccagtaccaagcttccttggcaggagtcca
atgcacagggtcactctgcaggaggttctcactctccttcccaatagcatggctctgctg
ctgcagaaagagccatggaaggaacagacccagaagttcattgactggctattcagcatc
atggaaagccctaaagaagccctctcagcacagtccagggatcttttgaaagccaccctg
ctgtccttgagagttctcccagagtttaagaagaaagctgtatggaccagagcatatggt
tggtga
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integrated database retrieval system