Homo sapiens (human): 55275 Help Entry 55275             CDS       T01001                                  Symbol VPS53, HCCS1, PCH2E, hVps53L, pp13624 Name (RefSeq) VPS53 subunit of GARP complex   KO K20299   vacuolar protein sorting-associated protein 53 Organism hsa  Homo sapiens (human) Disease H00897   Pontocerebellar hypoplasia Brite KEGG Orthology (KO) [BR:hsa00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:hsa04131]     55275 (VPS53) Membrane trafficking [BR:hsa04131]  Protein recycling   Others    EARP complex     55275 (VPS53)  Endosome - Golgi transport   Tethering complex    GARP complex     55275 (VPS53) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps53_N VPS53_C Vps54_N COG4_N GrpE FBF1 Sec8_N Laminin_II Syndetin_C NBD94 hAT-like_RNase-H COG5_N COG3_N MCPsignal NFRKB_winged FUSC Motif Other DBs NCBI-GeneID:  55275 NCBI-ProteinID:  NP_001121631 OMIM:  615850 HGNC:  25608 Ensembl:  ENSG00000141252 UniProt:  Q5VIR6 B3KS06 LinkDB All DBs Position 17:complement(508668..714839) Genome browser AA seq 832 aa AA seqDB search MMEEEELEFVEELEAVLQLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD ACLVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE KYGRMFPREWCMAERIAVEFCHVTRAELAKIMRTRAKEIEVKLLLFAIQRTTNFEGFLAK RFSGCTLTDGTLKKLESPPPSTNPFLEDEPTPEMEELATEKGDLDQPKKPKAPDNPFHGI VSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPNTDEGGAVLPSCADLFVYYKK CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTTSSGGLTISSLLKEKEGSE VAKFTLEELCLICNILSTAEYCLATTQQLEEKLKEKVDVSLIERINLTGEMDTFSTVISS SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR KYFTQFCVKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSISSQVVRK APASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKR SEQSSMLELLRQRLPAPPSGAESSGSLSLTAPTPEQESSRIRKLEKLIKKRL NT seq 2499 nt NT seq  +upstreamnt  +downstreamnt atgatggaggaggaggaactggagttcgtggaggagctggaagccgtgctgcagctcacg cccgaggtgcagctggccatcgagcaggtgtttccaagccaggaccctctagatcgagca gatttcaatgctgttgagtatatcaataccctgttcccaaccgagcaatctctggcgaac atagacgaagtcgtgaacaaaattaggctgaaaataaggagactggatgacaatattcga actgttgtaagaggtcagacgaacgtggggcaggatggacggcaagcgcttgaagaggct cagaaagctatccaacaactctttggcaaaatcaaagatatcaaagacaaagctgaaaaa tcagagcaaatggtgaaagaaatcacccgtgatattaagcaattagatcacgccaaacgc cacctgaccacctcaatcaccacactgaaccacctgcacatgctggcaggaggtgtcgac tccctcgaagccatgaccaggcgaagacaatacggagaagttgctaatctccttcagggt gtgatgaatgtcctggagcacttccacaagtatatggggattccgcagatccggcagctt tccgaaagagtgaaggctgcacagactgagttaggacagcaaatcctggcagattttgaa gaagcgtttccttcccagggcaccaagagaccaggaggacccagcaatgttctacgagat gcatgtctggttgctaatattctagatcccaggatcaaacaggaaatcatcaaaaagttt attaaacagcatctgtcagagtatctggtactttttcaagaaaaccaagatgttgcctgg ctggacaaaatcgacagacgctatgcctggataaaacgccagcttgtggactatgaggag aaatacggccgcatgtttccacgtgagtggtgcatggctgagaggattgcggtggaattt tgccatgtgacaagggcagaacttgccaagattatgcgtaccagagcgaaggaaattgaa gtgaaattgcttctttttgctattcaaagaacaactaactttgaggggtttcttgcaaaa cgcttctccggctgcaccctgaccgatgggaccctgaaaaagcttgagtctccaccccca tctaccaatcccttcctggaagatgagccaacaccagagatggaggaactggcaacggag aaaggagatttagatcaaccaaagaagcctaaagccccagacaatccatttcatggcatt gtttccaagtgttttgagcctcatctctacgtgtatatcgaatcccaagacaagaacctc ggagagctgatagatcggtttgtggctgatttcaaagcccaggggccacctaagcccaac actgatgaagggggtgccgtgctccccagctgcgccgacctctttgtctactacaagaag tgcatggtgcaatgctctcagctcagtactggggagcccatgatcgccctgaccaccatt ttccagaagtacctccgagaatacgcctggaaaatcctctctggcaacctgcccaaaacc acaaccagcagtggaggactgactatcagcagcctcctcaaggaaaaggagggctcagaa gtagccaagttcactctggaggagctctgcctcatctgtaacatcctgagcacggcagag tactgtctggccaccacccagcagctagaagaaaaactcaaagaaaaagtggatgtaagt ctgattgaacgaatcaatctgactggagagatggacacgttcagcaccgtcatctccagc agtattcagctgctggttcaggatctggatgctgcctgtgatcctgccctgactgccatg agcaagatgcagtggcagaacgtggagcacgttggtgaccagagcccctacgtcacctct gtcattctgcacatcaagcagaacgtccccatcatccgtgacaacctggcttccacacgc aagtacttcactcagttctgcgttaaatttgcaaactccttcattcccaaattcatcacc cacctcttcaagtgcaagccaattagcatggtgggagcagaacagctgctgctggacacc cactcgctgaagatggtcctgctcgatctcccctccatcagctcgcaggtggtgaggaag gcacccgccagctacaccaagatcgttgtcaaaggcatgacccgggctgagatgatcctc aaggtagtgatggcccctcatgaaccgttggtggtgtttgttgacaactacatcaaactt ctcacagactgcaacacagaaacctttcagaagatactggacatgaaggggctgaagagg agtgagcagagcagcatgctggaactcctgcgccagcggctccccgcaccgccctcgggg gcagaaagctccggctcactgtccctgacggcgccaacaccagagcaagagtcgtcacgc atccgcaagctcgagaaactcattaaaaagagactgtag

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