Homo sapiens (human): 55706
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Entry
55706 CDS
T01001
Symbol
NDC1, NET3, TMEM48
Name
(RefSeq) NDC1 transmembrane nucleoporin
KO
K14315
nucleoporin NDC1
Organism
hsa
Homo sapiens (human)
Pathway
hsa03013
Nucleocytoplasmic transport
hsa05014
Amyotrophic lateral sclerosis
Network
nt06464
Amyotrophic lateral sclerosis
Element
N01152
Nuclear export of mRNA
N01153
Mutation-caused aberrant GLE1 to nuclear export of mRNA
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
55706 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
55706 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsa03019
]
55706 (NDC1)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
55706 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
GP41
Motif
Other DBs
NCBI-GeneID:
55706
NCBI-ProteinID:
NP_060557
OMIM:
610115
HGNC:
25525
Ensembl:
ENSG00000058804
UniProt:
Q9BTX1
Structure
PDB
PDBj
LinkDB
All DBs
Position
1:complement(53765478..53838296)
Genome browser
AA seq
674 aa
AA seq
DB search
MATAVSRPCAGRSRDILWRVLGWRIVASIVWSVLFLPICTTVFIIFSRIDLFHPIQWLSD
SFSDLYSSYVIFYFLLLSVVIIIISIFNVEFYAVVPSIPCSRLALIGKIIHPQQLMHSFI
HAAMGMVMAWCAAVITQGQYSFLVVPCTGTNSFGSPAAQTCLNEYHLFFLLTGAFMGYSY
SLLYFVNNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCVESLFLVRNFCILYYFLGYIPKA
WISTAMNLHIDEQVHRPLDTVSGLLNLSLLYHVWLCGVFLLTTWYVSWILFKIYATEAHV
FPVQPPFAEGSDECLPKVLNSNPPPIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPH
NWTAISRECLNLLNGMTQKLILYQEAAATNGRVSSSYPVEPKKLNSPEETAFQTPKSSQM
PRPSVPPLVKTSLFSSKLSTPDVVSPFGTPFGSSVMNRMAGIFDVNTCYGSPQSPQLIRR
GPRLWTSASDQQMTEFSNPSPSTSISAEGKTMRQPSVIYSWIQNKREQIKNFLSKRVLIM
YFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQE
AVDKYFKLPHASSKPPRISGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASA
EHQKRLQQFLEFKE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggccacggccgtgagccggccctgcgccggcaggtcgcgggacatactgtggcgcgtt
ttgggctggaggatagttgcaagtattgtttggtcagtgctatttctacccatctgcacc
acagtatttataattttcagcaggattgatttgtttcatcctatacagtggctgtctgat
tctttcagtgacctgtatagttcctatgtaatcttttacttcctgctgctgtcagtggta
ataataataataagtattttcaatgtggagttctatgcagttgtgccttctattccttgc
tccagactagctctgatagggaagatcattcatcctcagcaactcatgcactcatttatt
catgctgcaatgggaatggtgatggcctggtgtgctgcagtgataacccagggccagtac
agctttcttgtggttccctgcactggtactaacagctttggtagccctgctgcgcaaacc
tgcttaaatgaatatcatctttttttcctactgactggagcatttatgggctatagctat
agcctcctgtattttgttaacaacatgaactatcttccatttcccatcatacagcaatac
aagttcttgcgttttaggagatctctgctcttattagttaaacacagttgtgtggaatca
ctgttcctggttagaaatttctgcattttatattattttcttggctatattcccaaagct
tggattagcactgctatgaaccttcacatagatgagcaggttcataggccacttgacaca
gtgagtggcctcttaaatctctcgttactctaccatgtctggctgtgtggtgtctttctc
ctgacgacttggtatgtctcatggatactcttcaaaatctatgccacagaggctcatgtg
tttcctgttcaaccaccatttgcagaagggtcagatgagtgccttccaaaagtgttaaat
agcaatcctccccccatcataaagtatttagccttgcaggacctgatgttgctttctcaa
tattctccttcacgaagacaagaagttttcagcctcagccaaccaggtggacatccccac
aattggacagccatttcaagggagtgtttgaatcttttaaatggtatgactcagaaactg
attctctatcaagaagctgctgctacgaatgggagagtgtcttcatcttacccagtggaa
cctaagaaattaaattctccagaagaaactgcttttcagacaccaaaatctagccagatg
cctcggccttcagtgccaccattagttaaaacatcactgttttcttcaaaattatctaca
cctgatgttgtgagcccatttgggaccccatttggctctagtgtaatgaatcggatggct
ggaatttttgatgtaaacacctgctatgggtcaccgcaaagtcctcagctaataagaagg
gggccaagattgtggacatcagcttctgatcagcaaatgactgaattttctaatccttct
ccatctacctctattagtgctgagggtaagacaatgagacaacccagtgtgatttattca
tggattcagaataaacgtgaacagattaagaatttcttgtcaaaacgggtgctgataatg
tattttttcagtaagcacccagaggcctccattcaggctgttttttcagatgcccaaatg
catatttgggcattagaaggtctgtcgcacttagtagcagcatcatttacagaggataga
tttggagttgtccagacgacactaccagctatccttaatactttgttgacactgcaagag
gcagtcgacaagtactttaagcttcctcatgcttccagtaaaccaccccggatttcagga
agccttgtggacacttcatataaaacattaagatttgcattcagagcatcactgaaaact
gccatctatcgaataactactacatttggtgaacatctgaatgctgtgcaagcatctgca
gaacatcagaaaagacttcaacagttcttggagttcaaagaatag
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