KEGG   Homo sapiens (human): 5818
Entry
5818              CDS       T01001                                 
Symbol
NECTIN1, CD111, CLPED1, ED4, HIgR, HV1S, HVEC, OFC7, PRR, PRR1, PVRL1, PVRR, PVRR1, SK-12, nectin-1
Name
(RefSeq) nectin cell adhesion molecule 1
  KO
K06081  poliovirus receptor-related protein 1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03266  Virion - Herpesvirus
hsa04514  Cell adhesion molecules
hsa04517  IgSF CAM signaling
hsa04520  Adherens junction
hsa05168  Herpes simplex virus 1 infection
Network
nt06546  IgSF CAM signaling
  Element
N01949  NECTIN1 interanctions
N01951  NECTIN3 interactions
N01952  NECTIN4 interactions
N01953  NECL1 interactions
N01955  CD96 interactions
Disease
H00516  Cleft lip and/or cleft palate
H02456  Ectodermal dysplasia
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    5818 (NECTIN1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    5818 (NECTIN1)
   04517 IgSF CAM signaling
    5818 (NECTIN1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    5818 (NECTIN1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    5818 (NECTIN1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    5818 (NECTIN1)
   04090 CD molecules [BR:hsa04090]
    5818 (NECTIN1)
Cell adhesion molecules [BR:hsa04515]
 Immunoglobulin superfamily
  Nectin family
   5818 (NECTIN1)
CD molecules [BR:hsa04090]
 Proteins
  5818 (NECTIN1)
SSDB
Motif
Pfam: C2-set_2 V-set Ig_3 Ig_2 ig I-set TM_ErbB1
Other DBs
NCBI-GeneID: 5818
NCBI-ProteinID: NP_002846
OMIM: 600644
HGNC: 9706
Ensembl: ENSG00000110400
UniProt: Q15223
Structure
LinkDB
Position
11:complement(119638098..119729200)
AA seq 517 aa
MARMGLAGAAGRWWGLALGLTAFFLPGVHSQVVQVNDSMYGFIGTDVVLHCSFANPLPSV
KITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEG
VYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPP
SVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLT
LNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTL
FFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEFPYTPSPPEHGRRAGPVPTAIIGGV
AGSILLVLIVVGGIVVALRRRRHTFKGDYSTKKHVYGNGYSKAGIPQHHPPMAQNLQYPD
DSDDEKKAGPLGGSSYEEEEEEEEGGGGGERKVGGPHPKYDEDAKRPYFTVDEAEARQDG
YGDRTLGYQYDPEQLDLAENMVSQNDGSFISKKEWYV
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggctcggatggggcttgcgggcgccgctggacgctggtggggactcgctctcggcttg
accgcattcttcctcccaggcgtccactcccaggtggtccaggtgaacgactccatgtat
ggcttcatcggcacagacgtggttctgcactgcagctttgccaacccgcttcccagcgtg
aagatcacccaggtcacatggcagaagtccaccaatggctccaagcagaacgtggccatc
tacaacccatccatgggcgtgtccgtgctggctccctaccgcgagcgtgtggaattcctg
cggccctccttcaccgatggcactatccgcctctcccgcctggagctggaggatgagggt
gtctacatctgcgagtttgctaccttccctacgggcaatcgagaaagccagctcaatctc
acggtgatggccaaacccaccaattggatagagggtacccaggcagtgcttcgagccaag
aaggggcaggatgacaaggtcctggtggccacctgcacctcagccaatgggaagcctccc
agtgtggtatcctgggaaactcggttaaaaggtgaggcagagtaccaggagatccggaac
cccaatggcacagtgacggtcatcagccgctaccgcctggtgcccagcagggaagcccac
cagcagtccttggcctgcatcgtcaactaccacatggaccgcttcaaggaaagcctcact
ctcaacgtgcagtatgagcctgaggtaaccattgaggggtttgatggcaactggtacctg
cagcggatggacgtgaagctcacctgcaaagctgatgctaaccccccagccactgagtac
cactggaccacgctaaatggctctctccccaagggtgtggaggcccagaacagaaccctc
ttcttcaagggacccatcaactacagcctggcagggacctacatctgtgaggccaccaac
cccatcggtacacgctcaggccaggtggaggtcaatatcacagaattcccctacaccccg
tctcctcccgaacatgggcggcgcgccgggccggtgcccacggccatcattgggggcgtg
gcggggagcatcctgctggtgttgattgtggtcggcgggatcgtggtcgccctgcgtcgg
cgccggcacaccttcaagggtgactacagcaccaagaagcacgtgtatggcaacggctac
agcaaggcaggcatcccccagcaccacccaccaatggcacagaacctgcagtaccccgac
gactcagacgacgagaagaaggccggcccactgggtggaagcagctatgaggaggaggag
gaggaggaggagggcggtggagggggcgagcgcaaggtgggcggcccccaccccaaatat
gacgaggacgccaagcggccctacttcaccgtggatgaggccgaggcccgtcaggacggc
tacggggaccggactctgggctaccagtacgaccctgagcagctggacttggctgagaac
atggtttctcagaacgacgggtctttcatttccaagaaggagtggtacgtgtag

KEGG   Homo sapiens (human): 57863
Entry
57863             CDS       T01001                                 
Symbol
CADM3, BIgR, CMT2FF, IGSF4B, NECL1, Necl-1, TSLL1, synCAM3
Name
(RefSeq) cell adhesion molecule 3
  KO
K06780  cell adhesion molecule 3
Organism
hsa  Homo sapiens (human)
Pathway
hsa04514  Cell adhesion molecules
hsa04517  IgSF CAM signaling
Network
nt06546  IgSF CAM signaling
  Element
N01953  NECL1 interactions
N01954  NECL2 interactions
Disease
H00264  Charcot-Marie-Tooth disease
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    57863 (CADM3)
   04517 IgSF CAM signaling
    57863 (CADM3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    57863 (CADM3)
Cell adhesion molecules [BR:hsa04515]
 Immunoglobulin superfamily
  Nectin family
   57863 (CADM3)
SSDB
Motif
Pfam: Ig_3 Ig_2 I-set ig C2-set_2 V-set C1-set C2-set_3 Ig_5 Syndecan
Other DBs
NCBI-GeneID: 57863
NCBI-ProteinID: NP_001120645
OMIM: 609743
HGNC: 17601
Ensembl: ENSG00000162706
UniProt: Q8N126
Structure
LinkDB
Position
1:159171615..159203313
AA seq 398 aa
MGAPAASLLLLLLLFACCWAPGGANLSQDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSL
QWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCSIFTMPVRTA
KSLVTVLGIPQKPIITGYKSSLREKDTATLNCQSSGSKPAARLTWRKGDQELHGEPTRIQ
EDPNGKTFTVSSSVTFQVTREDDGASIVCSVNHESLKGADRSTSQRIEVLYTPTAMIRPD
PPHPREGQKLLLHCEGRGNPVPQQYLWEKEGSVPPLKMTQESALIFPFLNKSDSGTYGCT
ATSNMGSYKAYYTLNVNDPSPVPSSSSTYHAIIGGIVAFIVFLLLIMLIFLGHYLIRHKG
TYLTHEAKGSDDAPDADTAIINAEGGQSGGDDKKEYFI
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgggggccccagccgcctcgctcctgctcctgctcctgctgttcgcctgctgctgggcg
cccggcggggccaacctctcccaggacgacagccagccctggacatctgatgaaacagtg
gtggctggtggcaccgtggtgctcaagtgccaagtgaaagatcacgaggactcatccctg
caatggtctaaccctgctcagcagactctctactttggggagaagagagcccttcgagat
aatcgaattcagctggttacctctacgccccacgagctcagcatcagcatcagcaatgtg
gccctggcagacgagggcgagtacacctgctcaatcttcactatgcctgtgcgaactgcc
aagtccctcgtcactgtgctaggaattccacagaagcccatcatcactggttataaatct
tcattacgggaaaaagacacagccaccctaaactgtcagtcttctgggagcaagcctgca
gcccggctcacctggagaaagggtgaccaagaactccacggagaaccaacccgcatacag
gaagatcccaatggtaaaaccttcactgtcagcagctcggtgacattccaggttacccgg
gaggatgatggggcgagcatcgtgtgctctgtgaaccatgaatctctaaagggagctgac
agatccacctctcaacgcattgaagttttatacacaccaactgcgatgattaggccagac
cctccccatcctcgtgagggccagaagctgttgctacactgtgagggtcgcggcaatcca
gtcccccagcagtacctatgggagaaggagggcagtgtgccacccctgaagatgacccag
gagagtgccctgatcttccctttcctcaacaagagtgacagtggcacctacggctgcaca
gccaccagcaacatgggcagctacaaggcctactacaccctcaatgttaatgaccccagt
ccggtgccctcctcctccagcacctaccacgccatcatcggtgggatcgtggctttcatt
gtcttcctgctgctcatcatgctcatcttccttggccactacttgatccggcacaaagga
acctacctgacacatgaggcaaaaggctccgacgatgctccagacgcggacacggccatc
atcaatgcagaaggcgggcagtcaggaggggacgacaagaaggaatatttcatctag

KEGG   Homo sapiens (human): 23705
Entry
23705             CDS       T01001                                 
Symbol
CADM1, BL2, IGSF4, IGSF4A, NECL2, Necl-2, RA175, ST17, SYNCAM, TSLC1, sTSLC-1, sgIGSF, synCAM1
Name
(RefSeq) cell adhesion molecule 1
  KO
K06781  cell adhesion molecule 1
Organism
hsa  Homo sapiens (human)
Pathway
hsa04514  Cell adhesion molecules
hsa04517  IgSF CAM signaling
Network
nt06546  IgSF CAM signaling
  Element
N01953  NECL1 interactions
N01954  NECL2 interactions
Disease
H00054  Nasopharyngeal cancer
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    23705 (CADM1)
   04517 IgSF CAM signaling
    23705 (CADM1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    23705 (CADM1)
Cell adhesion molecules [BR:hsa04515]
 Immunoglobulin superfamily
  Nectin family
   23705 (CADM1)
SSDB
Motif
Pfam: Ig_3 Ig_2 I-set ig V-set C2-set_2 Ig_C17orf99 C1-set Syndecan
Other DBs
NCBI-GeneID: 23705
NCBI-ProteinID: NP_055148
OMIM: 605686
HGNC: 5951
Ensembl: ENSG00000182985
UniProt: Q9BY67 X5D8W0
Structure
LinkDB
Position
11:complement(115169236..115504415)
AA seq 442 aa
MASVVLPSGSQCAAAAAAAAPPGLRLRLLLLLFSAAALIPTGDGQNLFTKDVTVIEGEVA
TISCQVNKSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLLNFSSSELKVSLTNVSISDEG
RYFCQLYTDPPQESYTTITVLVPPRNLMIDIQKDTAVEGEEIEVNCTAMASKPATTIRWF
KGNTELKGKSEVEEWSDMYTVTSQLMLKVHKEDDGVPVICQVEHPAVTGNLQTQRYLEVQ
YKPQVHIQMTYPLQGLTREGDALELTCEAIGKPQPVMVTWVRVDDEMPQHAVLSGPNLFI
NNLNKTDNGTYRCEASNIVGKAHSDYMLYVYDPPTTIPPPTTTTTTTTTTTTTILTIITD
SRAGEEGSIRAVDHAVIGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADA
DTAIINAEGGQNNSEEKKEYFI
NT seq 1329 nt   +upstreamnt  +downstreamnt
atggcgagtgtagtgctgccgagcggatcccagtgtgcggcggcagcggcggcggcggcg
cctcccgggctccggctccggcttctgctgttgctcttctccgccgcggcactgatcccc
acaggtgatgggcagaatctgtttacgaaagacgtgacagtgatcgagggagaggttgcg
accatcagttgccaagtcaataagagtgacgactctgtgattcagctactgaatcccaac
aggcagaccatttatttcagggacttcaggcctttgaaggacagcaggtttcagttgctg
aatttttctagcagtgaactcaaagtatcattgacaaacgtctcaatttctgatgaagga
agatacttttgccagctctataccgatcccccacaggaaagttacaccaccatcacagtc
ctggtcccaccacgtaatctgatgatcgatatccagaaagacactgcggtggaaggtgag
gagattgaagtcaactgcactgctatggccagcaagccagccacgactatcaggtggttc
aaagggaacacagagctaaaaggcaaatcggaggtggaagagtggtcagacatgtacact
gtgaccagtcagctgatgctgaaggtgcacaaggaggacgatggggtcccagtgatctgc
caggtggagcaccctgcggtcactggaaacctgcagacccagcggtatctagaagtacag
tataagcctcaagtgcacattcagatgacttatcctctacaaggcttaacccgggaaggg
gacgcgcttgagttaacatgtgaagccatcgggaagccccagcctgtgatggtaacttgg
gtgagagtcgatgatgaaatgcctcaacacgccgtactgtctgggcccaacctgttcatc
aataacctaaacaaaacagataatggtacataccgctgtgaagcttcaaacatagtgggg
aaagctcactcggattatatgctgtatgtatacgatccccccacaactatccctcctccc
acaacaaccaccaccaccaccaccaccaccaccaccaccatccttaccatcatcacagat
tcccgagcaggtgaagaaggctcgatcagggcagtggatcatgccgtgatcggtggcgtc
gtggcggtggtggtgttcgccatgctgtgcttgctcatcattctggggcgctattttgcc
agacataaaggtacatacttcactcatgaagccaaaggagccgatgacgcagcagacgca
gacacagctataatcaatgcagaaggaggacagaacaactccgaagaaaagaaagagtac
ttcatctag

KEGG   Homo sapiens (human): 253559
Entry
253559            CDS       T01001                                 
Symbol
CADM2, IGSF4D, NECL3, Necl-3, SynCAM_2, SynCAM-2, synCAM2
Name
(RefSeq) cell adhesion molecule 2
  KO
K06782  cell adhesion molecule 2
Organism
hsa  Homo sapiens (human)
Pathway
hsa04517  IgSF CAM signaling
Network
nt06546  IgSF CAM signaling
  Element
N01953  NECL1 interactions
N01954  NECL2 interactions
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    253559 (CADM2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    253559 (CADM2)
Cell adhesion molecules [BR:hsa04515]
 Immunoglobulin superfamily
  Nectin family
   253559 (CADM2)
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 V-set C2-set_2 C1-set Ig_5 Izumo-Ig Ig_6 C2-set_3 T-box_assoc MGC-24 DcuA_DcuB
Other DBs
NCBI-GeneID: 253559
NCBI-ProteinID: NP_001161146
OMIM: 609938
HGNC: 29849
Ensembl: ENSG00000175161
UniProt: Q8N3J6
LinkDB
Position
3:84958989..86074429
AA seq 435 aa
MIWKRSAVLRFYSVCGLLLQGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPA
QQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAYLTV
LGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRK
TFTVSSTLDFRVDRSDDGVAVICRVDHESLNATPQVAMQVLEIHYTPSVKIIPSTPFPQE
GQPLILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNILFLNKTDNGTYRCEATN
TIGQSSAEYVLIVHDVPNTLLPTTIIPSLTTATVTTTVAITTSPTTSATTSSIRDPNALA
GQNGPDHALIGGIVAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINA
EGSQVNAEEKKEYFI
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgatttggaaacgcagcgccgttctccgcttctacagtgtctgcgggctcctgctacaa
ggcagccaagggcagtttccactaacacagaatgtaaccgttgttgaaggtggaactgca
attttgacctgcagggttgatcaaaatgataacacctccctccagtggtcaaatccagct
caacagactctgtactttgacgacaagaaagctttaagggacaataggatcgagctggtt
cgcgcttcctggcatgaattgagtattagtgtcagtgatgtgtctctctctgatgaagga
cagtacacctgttctttatttacaatgcctgtcaaaacttccaaggcatatctcaccgtt
ctgggtgttcctgaaaagcctcagattagtggattctcatcaccagttatggagggtgac
ttgatgcagctgacttgcaaaacatctggtagtaaacctgcagctgatataagatggttc
aaaaatgacaaagagattaaagatgtaaaatatttaaaagaagaggatgcaaatcgcaag
acattcactgtcagcagcacactggacttccgagtggaccggagtgatgatggagtggcg
gtcatctgcagagtagatcacgaatccctcaatgccacccctcaggtagccatgcaggtg
ctagaaatacactatacaccatcagttaagattataccatcgactccttttccacaagaa
ggacagcctttaattttgacttgtgaatccaaaggaaaaccactgccagaacctgttttg
tggacaaaggatggcggagaattaccagatcctgaccgaatggttgtgagtggtagggag
ctaaacattcttttcctgaacaaaacggataatggtacatatcgatgtgaagccacaaac
accattggccaaagcagtgcggaatatgttctcattgtgcatgatgttcccaacactttg
cttcccactactatcatcccctcccttaccactgcaacagtcacaaccactgtagccata
acaaccagcccaaccacatctgcaacaaccagcagcatcagagatcctaatgctttggct
ggccagaatggccctgaccatgctctcataggaggaatagtggctgtagttgtatttgtc
acgctgtgttctatctttctgcttggtcgatatctggcaaggcataaaggaacgtattta
acaaatgaagctaaaggagctgaagatgcaccagatgctgatacagccattatcaatgct
gaaggcagccaagtcaatgctgaagagaaaaaagagtatttcatttaa

KEGG   Homo sapiens (human): 199731
Entry
199731            CDS       T01001                                 
Symbol
CADM4, IGSF4C, NECL4, Necl-4, TSLL2, synCAM4
Name
(RefSeq) cell adhesion molecule 4
  KO
K06783  cell adhesion molecule 4
Organism
hsa  Homo sapiens (human)
Pathway
hsa04517  IgSF CAM signaling
Network
nt06546  IgSF CAM signaling
  Element
N01953  NECL1 interactions
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    199731 (CADM4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    199731 (CADM4)
Cell adhesion molecules [BR:hsa04515]
 Immunoglobulin superfamily
  Nectin family
   199731 (CADM4)
SSDB
Motif
Pfam: Ig_3 Ig_2 I-set ig V-set C2-set_2 Ig_4 Ig_5 V-set_CD47 HemY_N
Other DBs
NCBI-GeneID: 199731
NCBI-ProteinID: NP_660339
OMIM: 609744
HGNC: 30825
Ensembl: ENSG00000105767
UniProt: Q8NFZ8
LinkDB
Position
19:complement(43622368..43641984)
AA seq 388 aa
MGRARRFQWPLLLLWAAAAGPGAGQEVQTENVTVAEGGVAEITCRLHQYDGSIVVIQNPA
RQTLFFNGTRALKDERFQLEEFSPRRVRIRLSDARLEDEGGYFCQLYTEDTHHQIATLTV
LVAPENPVVEVREQAVEGGEVELSCLVPRSRPAATLRWYRDRKELKGVSSSQENGKVWSV
ASTVRFRVDRKDDGGIIICEAQNQALPSGHSKQTQYVLDVQYSPTARIHASQAVVREGDT
LVLTCAVTGNPRPNQIRWNRGNESLPERAEAVGETLTLPGLVSADNGTYTCEASNKHGHA
RALYVLVVYDPGAVVEAQTSVPYAIVGGILALLVFLIICVLVGMVWCSVRQKGSYLTHEA
SGLDEQGEAREAFLNGSDGHKRKEEFFI
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgggccgggcccggcgcttccagtggccgctgctgctgctgtgggcggccgcggcgggg
ccaggggcaggacaggaagtacagacagagaacgtgacagtggctgagggtggggtggct
gagatcacctgccgtctgcaccagtatgatgggtccatagttgtcatccagaacccagcc
cggcagaccctcttcttcaatggcacccgtgccttgaaggatgagcgtttccagcttgag
gagttctccccacgccgggtgcggatccggctctcagatgcccgcctggaggacgagggg
ggctatttctgccagctctacacagaagacacccaccaccagattgccacgctcacggta
ctagtggccccagagaatcctgtggtggaggtccgggagcaggcggtagagggcggcgag
gtggagctcagctgcctcgttccgcggtcccgtccggctgccaccctgcgctggtaccgg
gaccgcaaggagctgaaaggagtgagcagcagccaggaaaatggcaaggtctggagcgtg
gcaagcacagtacggtttcgtgtggaccgtaaggacgacggtggtatcatcatctgtgag
gcgcagaaccaggcgctgccctccggacacagcaagcagacgcagtacgtgctggatgtg
cagtactcccccacggcccggattcatgcctcccaagctgtggtgagggagggagacacg
ctggtgttgacgtgtgctgtcacggggaaccccaggccaaaccagatccgctggaaccgc
gggaatgagtctttgccggagagggcggaggccgtgggagagacgctcacgctgccgggt
ctggtatccgcggataacggcacctacacttgcgaggcgtccaataagcacggccatgcg
agggcgctctacgtacttgtggtctacgaccctggtgcggtggtagaggctcagacgtcg
gttccctatgccattgtgggcggcatcctggcgctgctggtgtttctgatcatatgtgtg
ctagtgggcatggtctggtgctcggtacggcagaagggttcctatctgacccacgaagcc
agtggcttggatgaacagggagaagcaagagaagccttcctcaatggcagcgacggacac
aagaggaaagaggaattcttcatctga

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