Homo sapiens (human): 65217 Help Entry 65217             CDS       T01001                                  Symbol PCDH15, CDHR15, DFNB23, USH1F Name (RefSeq) protocadherin related 15   KO K16500   protocadherin-15 Organism hsa  Homo sapiens (human) Disease H00605   Deafness, autosomal recessive H00779   Usher syndrome Brite KEGG Orthology (KO) [BR:hsa00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:hsa03037]     65217 (PCDH15)    04515 Cell adhesion molecules [BR:hsa04515]     65217 (PCDH15) Cilium and associated proteins [BR:hsa03037]  Primary cilia and associated proteins   USH complex and associated proteins    65217 (PCDH15) Cell adhesion molecules [BR:hsa04515]  Cadherins   Protocadherins    65217 (PCDH15) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin ECD PCDH15_12th Cadherin_CELSR2_9th Motif Other DBs NCBI-GeneID:  65217 NCBI-ProteinID:  NP_149045 OMIM:  605514 HGNC:  14674 Ensembl:  ENSG00000150275 UniProt:  Q96QU1 Structure PDBPDBj LinkDB All DBs Position 10:complement(53802771..55627942) Genome browser AA seq 1955 aa AA seqDB search MFRQFYLWTCLASGIILGSLFEICLGQYDDDCKLARGGPPATIVAIDEESRNGTILVDNM LIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQC INKKVGTIIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDID DGPNGQIEYVIQYNPDDPTSNDTFEIPLMLTGNIVLRKRLNYEDKTRYFVIIQANDRAQN LNERRTTTTTLTVDVLDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIPELRTPEELNPIIV TPPIQAIDQDRNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELSLLEPVNRDFHQK FDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATISDSLNL TSPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFS ITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYVYTDMRPGDSVIQLTAVDADEGS NGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAPPAERRNSICT VYIEVLPPNNQSPPRFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRV FNLSETTGILTLGKALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVFDPY LPRNLSVVEEEANAFVGQVKATDPDAGINGQVHYSLGNFNNLFRITSNGSIYTAVKLNRE VRDYYELVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQ IEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFD IYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADPPGLPA SRVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPVMSSSA TVKILVLHPGEIPRFTQEEYRPPPVSELATKGTMVGVISAAAINQSIVYSIVSGNEEDTF GINNITGVIYVNGPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENNH PPVFQKKFYIGGVSEDARMFTSVLRVKATDKDTGNYSVMAYRLIIPPIKEGKEGFVVETY TGLIKTAMLFHNMRRSYFKFQVIATDDYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLV EKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDPQTNRA IDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLAL AFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQAALPAAKPAVPAPAPVAAPPPPPP PPPGAHLYEELGDSSILFLLYHFQQSRGNNSVSEDRKHQQVVMPFSSNTIEAHKSAHVDG SLKSNKLKSARKFTFLSDEDDLSAHNPLYKENISQVSTNSDISQRTDFVDPFSPKIQAKS KSLRGPREKIQRLWSQSVSLPRRLMRKVPNRPEIIDLQQWQGTRQKAENENTGICTNKRG SSNPLLTTEEANLTEKEEIRQGETLMIEGTEQLKSLSSDSSFCFPRPHFSFSTLPTVSRT VELKSEPNVISSPAECSLELSPSRPCVLHSSLSRRETPICMLPIETERNIFENFAHPPNI SPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSV STSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVKCTTNLMPAEKIKS SMTQLSTTTVCKTDPQREPKGILRHVKNLAELEKSVANMYSQIEKNYLRTNVSELQTMCP SEVTNMEITSEQNKGSLNNIVEGTEKQSHSQSTSL NT seq 5868 nt NT seq  +upstreamnt  +downstreamnt atgtttcgacagttttatctctggacatgtttagcttcagggatcatcctgggctctctc tttgaaatctgcttgggccagtatgatgatgattgcaaactagctaggggaggaccacca gctaccatagttgctattgatgaagaaagtcggaatggtacaattctggtggacaacatg ctgatcaaagggactgctggaggaccagaccccaccatagaactttctttaaaggataat gtggattactgggtgttgatggatcctgttaagcaaatgcttttcctgaacagcaccgga agagttctggatagagatccaccgatgaacatacactccattgtggtgcaggtccagtgc atcaacaaaaaagtgggcactattatctaccatgaagtgcgaatagtggtgagagacagg aatgacaactcacccactttcaagcatgaaagctactatgccacagtgaatgagctcact ccagttggtaccacaatattcacaggattttcaggagacaatggagctacagatatagat gatggaccaaatggacagatagagtatgttattcagtataatccagatgatccgacatcc aatgacacctttgaaattcccctaatgttgactggaaatatagtgttaaggaagaggctc aactatgaagataagactcgctactttgtcataatccaagctaatgaccgtgcccaaaat ctgaatgagaggcgaaccaccaccaccactctcacagtggatgttctggatggagatgac ttgggtccaatgtttcttccttgtgtccttgtgccaaacactcgtgattgccgtccactc acttatcaagctgccatacctgagttgagaactccggaagaactgaaccccattattgtt acgccaccaatccaagccattgatcaggaccggaatattcaaccgccatcagataggcca ggaatcctctattccatccttgttgggactcctgaggattacccacgatttttccatatg catcctaggacagcagaacttagtctcctggagccagtaaacagagactttcaccagaaa tttgatttggttattaaggctgaacaagacaatggtcatcctcttcctgcctttgccggt ctacacattgaaatactggatgaaaacaatcaaagtccatattttacaatgcccagttat caaggctatatcctggaatctgccccagtgggagcaaccatttcggacagtctcaatttg acttcacctttaagaatagtagctctggacaaggacatagaagatacaaaagacccagag cttcacctttttctgaatgactacacctcagtcttcaccgtcacacagactggtattact cgctacctcaccttacttcaaccagtggacagggaagaacagcaaacttacaccttttcg ataacagcatttgatggtgtacaagaaagtgagccagtcatcgtcaatattcaagtgatg gatgcaaatgataacacgccaaccttccctgaaatatcctatgatgtgtatgtttataca gacatgagacctggggacagtgtcatacagctcactgcagtcgacgcagacgaagggtca aatggggagatcacatatgaaatccttgttggggctcagggagacttcatcatcaataaa acaacagggcttatcaccatcgctccaggggtggaaatgatagtcgggcggacttacgca ctcacggtccaagcagcggataatgctcctcctgcagagcgaaggaactccatctgcact gtgtatattgaagtgcttccaccaaataatcaaagccctcctcgcttcccacagctgatg tatagccttgaaattagtgaagccatgagggttggtgctgttttattaaatctacaggca actgatcgagagggagactcaataacatatgccattgagaatggagatcctcagagagtt tttaatctttcagaaaccacggggattctaaccttagggaaagcactggacagggaaagc actgatcgctacattctgatcatcacagcttcagatggcaggccagatgggacctcaact gccacagtaaacatagtggtgacagatgtcaatgacaatgctccagtgtttgatccttat ctgccaagaaatttatctgtggtggaagaagaagccaatgcctttgtgggtcaagtaaaa gcaacagaccctgatgctggaataaatggtcaagtgcactacagtttgggtaactttaat aatctttttcgtatcacatccaatgggagcatttacacagcagtgaagcttaacagagaa gtcagggactactatgaacttgttgttgtggcaacagatggagcagtacaccctcgtcat tcaactctaaccttggccatcaaggttttggacattgatgataacagtcctgtgttcacc aattcaacatacactgtccttgttgaagagaatttgccagctgggactaccatccttcaa atagaggccaaagatgtcgaccttggagcaaatgtgtcttaccggataagaagcccagaa gtgaagcacttttttgcactacatccatttacaggagaactatcgcttttaaggagttta gattatgaggcatttccagaccaagaagcaagtatcacttttctggtagaggcctttgat atttatggaacaatgccacctggtattgctactgtcacagtgattgtaaaggatatgaat gattatcctcctgtctttagtaaacgaatatacaaagggatggtggctccggatgcagtc aagggtacacctatcacaacagtttatgctgaagatgcagaccctcctggattacctgca agtcgtgtgaggtatagagtagatgatgtacagtttccttaccctgccagtatttttgaa gtggaagaagattctggaagagtaataacacgagtcaatcttaatgaagaacctacaaca atttttaagttggtggtggttgcttttgatgatggggagcctgtgatgtccagcagtgcc acagtgaagattcttgtcttacatcctggtgagatcccacgcttcacacaggaggaatat agacctcctccagtaagtgaacttgccaccaaagggaccatggttggtgtaatttctgct gctgccattaatcaaagtattgtgtactccattgtttcaggaaatgaagaagatacattt ggaattaataacatcacaggtgttatctatgtgaatggacctctggattatgagaccagg acaagctatgtacttcgagtccaagctgattccctggaagtggtccttgccaatctccga gttccttcaaaaagcaatacagctaaagtatacattgagattcaggatgaaaataatcat cccccagtgtttcagaaaaaattctacatcggaggtgtatctgaagatgcaagaatgttt acttctgtactcagagtgaaggctactgataaagatactggcaattatagtgtcatggcc tacagactcataataccaccaattaaagagggaaaagaaggatttgtagtggaaacatat acagggcttatcaaaactgctatgctcttccataatatgaggagatcctacttcaagttt caagttattgcaactgacgactatgggaagggactgagcggcaaagccgatgtactcgtc tccgtggtcaatcagctggatatgcaagtcattgtttccaatgtgcctcctactctagtg gaaaaaaagatagaagatcttacagagatcttggatcgctatgttcaggaacaaattcct ggtgccaaggtcgtagtggagtccattggagctcgccggcatggagatgccttttcccta gaagattacaccaaatgtgacttgactgtctatgcaattgacccccaaaccaacagagcc atcgatagaaatgagctttttaaatttttggatggcaaactacttgatatcaataaagac tttcagccgtattatggggaaggaggacgcattctggagatccggactccagaggcagtg accagcattaaaaagagaggagaaagtctaggatacacagaaggggccttgttggctctg gccttcatcatcatcctctgctgcattcctgccatcttggtggttttggtcagctacaga cagtttaaagtacgtcaagctgagtgtacaaagactgcacgaattcaggccgcattaccc gcggctaaaccagcagtgccggctcctgcaccagtggcagcgcccccgccgccgccgccg cctccgccaggtgcgcatctctatgaagaacttggagacagctcaattcttttccttctc taccattttcaacaaagcaggggaaataactcagtctcagaagacaggaaacatcaacaa gttgtgatgcccttttcttccaatactattgaggctcacaagtcagctcatgtagacgga tcacttaagagcaacaaactgaagtctgcaagaaaattcacatttctatctgatgaggat gacttaagtgcccataatcccctttataaggaaaacataagtcaagtatcaacaaattca gacatttcacagagaacagattttgtagacccattttcacccaaaatacaagccaagagt aagtctctgaggggcccaagagaaaagattcagaggctgtggagtcagtcagtcagctta cccaggaggctgatgaggaaagttccaaatagaccagagatcatagatctgcagcagtgg caaggcaccaggcagaaagctgaaaatgaaaacactggaatctgtacaaacaaaagaggt agcagcaatccattgcttacaactgaagaggcaaatttgacagagaaagaggaaataagg caaggtgaaacactgatgatagaaggaacagaacagttgaaatctctctcttcagactct tcattttgctttcccaggcctcacttctcattctccactttgccaactgtttcaagaact gtggaactcaaatcagaacctaatgtcatcagttctcctgctgagtgttccttggaactt tctccttcaaggccttgtgttttacattcttcactctctaggagagagacacctatttgt atgttacctattgaaaccgaaagaaatatttttgaaaattttgcccatccaccaaacatc tctccttctgcctgtccccttccccctcctcctcctatttctcctccttctcctcctcct gctcctgctcctcttgctcctcctcctgacatttctcctttttctcttttttgtcctcct ccctctcctccttctatccctcttcctcttcctcctcctacattttttccactttccgtt tcaacgtctggtcccccaacaccacctcttctacctccatttccaactcctcttcctcca ccacctccttctattccttgccctccacctccttcagcttcatttctgtccacagagtgt gtctgtataacaggtgttaaatgcacgaccaacttgatgcctgccgagaaaattaagtcc tctatgacacagctatcaacaacgacagtgtgtaaaacagaccctcagagagaaccaaaa ggcatcctcagacacgttaaaaacttagcagaacttgaaaaatcagtagctaacatgtac agtcaaatagaaaaaaactatctacgcacaaatgtttcagaacttcaaactatgtgccct tcagaagtaacaaatatggaaatcacatctgaacaaaacaaggggagtttgaacaatatt gtcgagggaactgaaaaacaatctcacagtcaatctacttcactgtaa

DBGET integrated database retrieval system