Entry |
|
Symbol |
SOX2, ANOP3, MCOPS3
|
Name |
(RefSeq) SRY-box transcription factor 2
|
KO |
K16796 | transcription factor SOX2 (SOX group B) |
|
Organism |
|
Pathway |
hsa04550 | Signaling pathways regulating pluripotency of stem cells |
|
Disease |
H02170 | Microphthalmia, syndromic |
|
Brite |
KEGG Orthology (KO) [BR:hsa00001]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
6657 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
6657 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:hsa03000]
6657 (SOX2)
Transcription factors [BR:hsa03000]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
6657 (SOX2)
|
SSDB |
|
Motif |
|
Other DBs |
|
Structure |
|
LinkDB |
|
Position |
3:181711925..181714436
|
AA seq |
317 aa
MYNMMETELKPPGPQQTSGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRKMA
QENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLM
KKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQLGY
PQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALGSM
GSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQS
GPVPGTAINGTLPLSHM |
NT seq |
954 nt +upstreamnt +downstreamnt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcaactccaccgcggcggcggccggcggcaaccagaaaaacagcccggaccgc
gtcaagcggcccatgaatgccttcatggtgtggtcccgcgggcagcggcgcaagatggcc
caggagaaccccaagatgcacaactcggagatcagcaagcgcctgggcgccgagtggaaa
cttttgtcggagacggagaagcggccgttcatcgacgaggctaagcggctgcgagcgctg
cacatgaaggagcacccggattataaataccggccccggcggaaaaccaagacgctcatg
aagaaggataagtacacgctgcccggcgggctgctggcccccggcggcaatagcatggcg
agcggggtcggggtgggcgccggcctgggcgcgggcgtgaaccagcgcatggacagttac
gcgcacatgaacggctggagcaacggcagctacagcatgatgcaggaccagctgggctac
ccgcagcacccgggcctcaatgcgcacggcgcagcgcagatgcagcccatgcaccgctac
gacgtgagcgccctgcagtacaactccatgaccagctcgcagacctacatgaacggctcg
cccacctacagcatgtcctactcgcagcagggcacccctggcatggctcttggctccatg
ggttcggtggtcaagtccgaggccagctccagcccccctgtggttacctcttcctcccac
tccagggcgccctgccaggccggggacctccgggacatgatcagcatgtatctccccggc
gccgaggtgccggaacccgccgcccccagcagacttcacatgtcccagcactaccagagc
ggcccggtgcccggcacggccattaacggcacactgcccctctcacacatgtga |